Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN20P56880 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN20P56880 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN20P56880 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN20P56880 AC132872.4-202ENST00000622924 2756 ntBASIC15.35■□□□□ 0.05
CLDN20P56880 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 AC105917.1-201ENST00000506637 2539 ntBASIC15.35■□□□□ 0.05
CLDN20P56880 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN20P56880 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
CLDN20P56880 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 LINC02012-201ENST00000608206 1725 ntBASIC15.34■□□□□ 0.05
CLDN20P56880 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLDN20P56880 AL513523.2-202ENST00000427283 2040 ntBASIC15.34■□□□□ 0.05
CLDN20P56880 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN20P56880 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CLDN20P56880 PGAM5P1-201ENST00000518923 814 ntBASIC15.34■□□□□ 0.05
CLDN20P56880 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 AC092053.1-201ENST00000605787 1936 ntBASIC15.34■□□□□ 0.05
CLDN20P56880 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 PMS2P7-201ENST00000506558 1336 ntBASIC15.34■□□□□ 0.05
CLDN20P56880 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLDN20P56880 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDN20P56880 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDN20P56880 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN20P56880 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
CLDN20P56880 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN20P56880 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CLDN20P56880 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN20P56880 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDN20P56880 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CLDN20P56880 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLDN20P56880 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CLDN20P56880 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.33■□□□□ 0.04
CLDN20P56880 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN20P56880 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.33■□□□□ 0.04
CLDN20P56880 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDN20P56880 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.33■□□□□ 0.04
CLDN20P56880 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.33■□□□□ 0.04
CLDN20P56880 AC018845.2-201ENST00000568326 409 ntBASIC15.33■□□□□ 0.04
CLDN20P56880 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLDN20P56880 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN20P56880 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CLDN20P56880 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 AC002310.6-201ENST00000624451 1377 ntBASIC15.33■□□□□ 0.04
CLDN20P56880 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CLDN20P56880 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDN20P56880 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN20P56880 FRMD8P1-201ENST00000440433 1524 ntBASIC15.33■□□□□ 0.04
CLDN20P56880 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN20P56880 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms