Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 RN7SL510P-201ENST00000581311 263 ntBASIC15.91■□□□□ 0.14
NR1H2P55055 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.91■□□□□ 0.14
NR1H2P55055 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.91■□□□□ 0.14
NR1H2P55055 Z69720.1-201ENST00000601483 472 ntBASIC15.91■□□□□ 0.14
NR1H2P55055 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NR1H2P55055 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 AL009178.2-201ENST00000597278 2719 ntBASIC15.91■□□□□ 0.14
NR1H2P55055 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR1H2P55055 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NR1H2P55055 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NR1H2P55055 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.91■□□□□ 0.14
NR1H2P55055 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.91■□□□□ 0.14
NR1H2P55055 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NR1H2P55055 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NR1H2P55055 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NR1H2P55055 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H2P55055 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H2P55055 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H2P55055 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H2P55055 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.9■□□□□ 0.14
NR1H2P55055 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H2P55055 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.9■□□□□ 0.14
NR1H2P55055 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H2P55055 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H2P55055 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H2P55055 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.9■□□□□ 0.14
NR1H2P55055 HLA-A-202ENST00000376806 1854 ntBASIC15.9■□□□□ 0.14
NR1H2P55055 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 AC073347.1-201ENST00000421633 2643 ntBASIC15.9■□□□□ 0.14
NR1H2P55055 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H2P55055 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
NR1H2P55055 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NR1H2P55055 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NR1H2P55055 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NR1H2P55055 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.89■□□□□ 0.13
NR1H2P55055 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.89■□□□□ 0.13
NR1H2P55055 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NR1H2P55055 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NR1H2P55055 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
NR1H2P55055 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.89■□□□□ 0.13
NR1H2P55055 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.89■□□□□ 0.13
NR1H2P55055 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.89■□□□□ 0.13
NR1H2P55055 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.89■□□□□ 0.13
NR1H2P55055 AC091304.2-201ENST00000564639 760 ntBASIC15.89■□□□□ 0.13
NR1H2P55055 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.89■□□□□ 0.13
NR1H2P55055 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.89■□□□□ 0.13
NR1H2P55055 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NR1H2P55055 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.89■□□□□ 0.13
NR1H2P55055 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NR1H2P55055 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H2P55055 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.89■□□□□ 0.13
NR1H2P55055 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H2P55055 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H2P55055 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NR1H2P55055 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
NR1H2P55055 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms