Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGA2P52926 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMGA2P52926 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMGA2P52926 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.24■□□□□ 0.03
HMGA2P52926 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGA2P52926 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
HMGA2P52926 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
HMGA2P52926 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 AL353732.1-201ENST00000569618 1459 ntBASIC15.23■□□□□ 0.03
HMGA2P52926 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGA2P52926 MIR648-201ENST00000385046 94 ntBASIC15.23■□□□□ 0.03
HMGA2P52926 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 PMS2P1-201ENST00000431037 1228 ntBASIC15.23■□□□□ 0.03
HMGA2P52926 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.23■□□□□ 0.03
HMGA2P52926 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGA2P52926 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.23■□□□□ 0.03
HMGA2P52926 AC020765.3-201ENST00000613051 740 ntBASIC15.23■□□□□ 0.03
HMGA2P52926 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGA2P52926 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGA2P52926 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HMGA2P52926 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HMGA2P52926 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGA2P52926 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGA2P52926 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HMGA2P52926 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.23■□□□□ 0.03
HMGA2P52926 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.22■□□□□ 0.03
HMGA2P52926 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HMGA2P52926 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HMGA2P52926 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGA2P52926 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
HMGA2P52926 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.22■□□□□ 0.03
HMGA2P52926 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 RBM17P3-201ENST00000417687 1192 ntBASIC15.22■□□□□ 0.03
HMGA2P52926 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGA2P52926 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.22■□□□□ 0.03
HMGA2P52926 AC004706.3-202ENST00000621574 984 ntBASIC15.22■□□□□ 0.03
HMGA2P52926 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGA2P52926 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 IER3-202ENST00000376377 1350 ntBASIC15.22■□□□□ 0.03
HMGA2P52926 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGA2P52926 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGA2P52926 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGA2P52926 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMGA2P52926 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGA2P52926 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HMGA2P52926 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGA2P52926 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMGA2P52926 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGA2P52926 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGA2P52926 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGA2P52926 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HMGA2P52926 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGA2P52926 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms