Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
PTPN1P18031 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN1P18031 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PTPN1P18031 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
PTPN1P18031 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PTPN1P18031 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN1P18031 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN1P18031 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PTPN1P18031 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN1P18031 SPCS2P4-201ENST00000436160 681 ntBASIC17.64■□□□□ 0.41
PTPN1P18031 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN1P18031 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN1P18031 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN1P18031 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN1P18031 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN1P18031 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
PTPN1P18031 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN1P18031 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PTPN1P18031 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN1P18031 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PTPN1P18031 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PTPN1P18031 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PTPN1P18031 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PTPN1P18031 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN1P18031 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PTPN1P18031 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 HLA-J-202ENST00000469281 1241 ntBASIC17.63■□□□□ 0.41
PTPN1P18031 KRT18P34-201ENST00000488218 1270 ntBASIC17.63■□□□□ 0.41
PTPN1P18031 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 LINC01225-203ENST00000563550 1244 ntBASIC17.63■□□□□ 0.41
PTPN1P18031 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 AC027612.4-201ENST00000605371 583 ntBASIC17.63■□□□□ 0.41
PTPN1P18031 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN1P18031 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN1P18031 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN1P18031 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN1P18031 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN1P18031 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN1P18031 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms