Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 AP002490.2-201ENST00000524791 560 ntBASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 RFPL4AP1-201ENST00000530883 850 ntBASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 AC009093.7-201ENST00000623853 1223 ntBASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 AC105020.1-201ENST00000435356 2205 ntBASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.32■□□□□ 0.52
SRGAP2CP0DJJ0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 KRT18P34-201ENST00000488218 1270 ntBASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 AC025678.2-201ENST00000562061 970 ntBASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 AL355385.1-201ENST00000606123 409 ntBASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.31■□□□□ 0.52
SRGAP2CP0DJJ0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 AC080080.1-201ENST00000625121 2420 ntBASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 RBPMS2P1-201ENST00000437762 623 ntBASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 KRT8P23-201ENST00000560090 1207 ntBASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 AC008267.7-201ENST00000624570 1194 ntBASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 AL603756.1-201ENST00000606511 2163 ntBASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRGAP2CP0DJJ0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms