Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCRP04035 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCRP04035 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCRP04035 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCRP04035 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCRP04035 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCRP04035 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCRP04035 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCRP04035 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HMGCRP04035 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCRP04035 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HMGCRP04035 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
HMGCRP04035 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 TTTY23B-201ENST00000442790 549 ntBASIC18.69■□□□□ 0.58
HMGCRP04035 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCRP04035 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 RN7SL837P-201ENST00000463010 287 ntBASIC18.69■□□□□ 0.58
HMGCRP04035 AC055876.2-201ENST00000531834 546 ntBASIC18.69■□□□□ 0.58
HMGCRP04035 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HMGCRP04035 AL512361.1-201ENST00000554200 418 ntBASIC18.69■□□□□ 0.58
HMGCRP04035 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCRP04035 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCRP04035 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCRP04035 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCRP04035 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCRP04035 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGCRP04035 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCRP04035 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
HMGCRP04035 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGCRP04035 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCRP04035 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
HMGCRP04035 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCRP04035 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCRP04035 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.68■□□□□ 0.58
HMGCRP04035 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMGCRP04035 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMGCRP04035 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMGCRP04035 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCRP04035 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCRP04035 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCRP04035 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCRP04035 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.67■□□□□ 0.58
HMGCRP04035 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HMGCRP04035 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCRP04035 SPDYE18-201ENST00000510091 1050 ntBASIC18.67■□□□□ 0.58
HMGCRP04035 AC044860.1-202ENST00000559481 777 ntBASIC18.67■□□□□ 0.58
HMGCRP04035 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HMGCRP04035 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCRP04035 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms