Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.33■□□□□ 0.36
IFNB1P01574 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 AL513523.2-202ENST00000427283 2040 ntBASIC17.33■□□□□ 0.36
IFNB1P01574 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IFNB1P01574 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.33■□□□□ 0.36
IFNB1P01574 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
IFNB1P01574 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.33■□□□□ 0.36
IFNB1P01574 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.32■□□□□ 0.36
IFNB1P01574 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.32■□□□□ 0.36
IFNB1P01574 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.32■□□□□ 0.36
IFNB1P01574 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.32■□□□□ 0.36
IFNB1P01574 ME2P1-201ENST00000426028 1970 ntBASIC17.32■□□□□ 0.36
IFNB1P01574 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.32■□□□□ 0.36
IFNB1P01574 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.32■□□□□ 0.36
IFNB1P01574 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IFNB1P01574 KRT18P31-201ENST00000506277 1292 ntBASIC17.32■□□□□ 0.36
IFNB1P01574 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.32■□□□□ 0.36
IFNB1P01574 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.32■□□□□ 0.36
IFNB1P01574 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IFNB1P01574 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.32■□□□□ 0.36
IFNB1P01574 AC013467.2-201ENST00000605472 835 ntBASIC17.32■□□□□ 0.36
IFNB1P01574 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.32■□□□□ 0.36
IFNB1P01574 AL121772.3-201ENST00000610840 674 ntBASIC17.32■□□□□ 0.36
IFNB1P01574 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.32■□□□□ 0.36
IFNB1P01574 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
IFNB1P01574 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IFNB1P01574 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.32■□□□□ 0.36
IFNB1P01574 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFNB1P01574 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.32■□□□□ 0.36
IFNB1P01574 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IFNB1P01574 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
IFNB1P01574 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.31■□□□□ 0.36
IFNB1P01574 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.31■□□□□ 0.36
IFNB1P01574 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.31■□□□□ 0.36
IFNB1P01574 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.31■□□□□ 0.36
IFNB1P01574 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
IFNB1P01574 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.31■□□□□ 0.36
IFNB1P01574 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.31■□□□□ 0.36
IFNB1P01574 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
IFNB1P01574 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.31■□□□□ 0.36
IFNB1P01574 SART3-203ENST00000546611 1184 ntBASIC17.31■□□□□ 0.36
IFNB1P01574 AC139887.3-201ENST00000568585 713 ntBASIC17.31■□□□□ 0.36
IFNB1P01574 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 AL355877.3-201ENST00000622820 899 ntBASIC17.31■□□□□ 0.36
IFNB1P01574 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IFNB1P01574 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 AL671710.1-201ENST00000610245 2349 ntBASIC17.31■□□□□ 0.36
IFNB1P01574 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.31■□□□□ 0.36
IFNB1P01574 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFNB1P01574 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms