Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC7.32□□□□□ -1.24
USH2AO75445 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USH2AO75445 PLS3-210ENST00000626746 216 ntTSL 4 BASIC7.32□□□□□ -1.24
USH2AO75445 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC7.32□□□□□ -1.24
USH2AO75445 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 APOA1-205ENST00000375329 927 ntTSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 RN7SL399P-201ENST00000471648 279 ntBASIC7.31□□□□□ -1.24
USH2AO75445 TDH-203ENST00000531764 1110 ntBASIC7.31□□□□□ -1.24
USH2AO75445 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 AC079336.7-201ENST00000623428 1078 ntBASIC7.31□□□□□ -1.24
USH2AO75445 AC004461.2-201ENST00000629517 803 ntBASIC7.31□□□□□ -1.24
USH2AO75445 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 AC131009.4-201ENST00000624048 1740 ntBASIC7.31□□□□□ -1.24
USH2AO75445 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 SLC9A3P2-201ENST00000447821 2021 ntBASIC7.31□□□□□ -1.24
USH2AO75445 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
USH2AO75445 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC7.31□□□□□ -1.24
USH2AO75445 MNT-208ENST00000575394 606 ntTSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC7.31□□□□□ -1.24
USH2AO75445 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 AC073592.3-201ENST00000625118 1834 ntBASIC7.31□□□□□ -1.24
USH2AO75445 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CROCCP3-202ENST00000420820 1947 ntBASIC7.31□□□□□ -1.24
USH2AO75445 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 NKAIN1P1-201ENST00000435754 582 ntBASIC7.31□□□□□ -1.24
USH2AO75445 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
USH2AO75445 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC7.31□□□□□ -1.24
USH2AO75445 AP006547.1-201ENST00000563435 692 ntBASIC7.31□□□□□ -1.24
USH2AO75445 KLK3-211ENST00000597483 810 ntTSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 GRN-222ENST00000639447 1314 ntTSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
USH2AO75445 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USH2AO75445 CD276-201ENST00000318424 2738 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 KRTAP19-9P-201ENST00000421795 191 ntBASIC7.31□□□□□ -1.24
USH2AO75445 AL355864.2-201ENST00000447420 863 ntBASIC7.31□□□□□ -1.24
USH2AO75445 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC7.31□□□□□ -1.24
USH2AO75445 RARRES2P5-201ENST00000564013 466 ntBASIC7.31□□□□□ -1.24
USH2AO75445 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC7.31□□□□□ -1.24
USH2AO75445 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC7.31□□□□□ -1.24
USH2AO75445 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC7.31□□□□□ -1.24
USH2AO75445 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms