Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.12■□□□□ 0.65
CYTH3O43739 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYTH3O43739 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CYTH3O43739 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYTH3O43739 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CYTH3O43739 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CYTH3O43739 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.12■□□□□ 0.65
CYTH3O43739 AC009093.7-201ENST00000623853 1223 ntBASIC19.12■□□□□ 0.65
CYTH3O43739 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CYTH3O43739 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYTH3O43739 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYTH3O43739 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYTH3O43739 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CYTH3O43739 ALOX12P2-203ENST00000570921 1945 ntBASIC19.12■□□□□ 0.65
CYTH3O43739 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 AC005237.2-201ENST00000434368 219 ntBASIC19.11■□□□□ 0.65
CYTH3O43739 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 SLC25A39P2-201ENST00000537614 270 ntBASIC19.11■□□□□ 0.65
CYTH3O43739 KRT8P23-201ENST00000560090 1207 ntBASIC19.11■□□□□ 0.65
CYTH3O43739 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.11■□□□□ 0.65
CYTH3O43739 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.11■□□□□ 0.65
CYTH3O43739 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CYTH3O43739 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYTH3O43739 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CYTH3O43739 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.1■□□□□ 0.65
CYTH3O43739 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.1■□□□□ 0.65
CYTH3O43739 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 KRT18P28-201ENST00000453838 1332 ntBASIC19.1■□□□□ 0.65
CYTH3O43739 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.1■□□□□ 0.65
CYTH3O43739 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.1■□□□□ 0.65
CYTH3O43739 HLA-J-203ENST00000494367 1087 ntBASIC19.1■□□□□ 0.65
CYTH3O43739 AC109322.1-201ENST00000524499 1264 ntBASIC19.1■□□□□ 0.65
CYTH3O43739 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.1■□□□□ 0.65
CYTH3O43739 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.1■□□□□ 0.65
CYTH3O43739 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.1■□□□□ 0.65
CYTH3O43739 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CYTH3O43739 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYTH3O43739 PCGF3-213ENST00000620529 1899 ntBASIC19.09■□□□□ 0.65
CYTH3O43739 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYTH3O43739 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYTH3O43739 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.09■□□□□ 0.65
CYTH3O43739 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CYTH3O43739 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms