Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 ZNF259P1-201ENST00000407656 1365 ntBASIC14.87□□□□□ -0.03
TRAF3IP2O43734 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 RNU1-129P-201ENST00000384064 167 ntBASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AL031432.2-201ENST00000566714 459 ntBASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AC106730.1-201ENST00000566722 1090 ntBASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AL928711.1-201ENST00000570165 459 ntBASIC14.87□□□□□ -0.03
TRAF3IP2O43734 U1.21-201ENST00000580816 167 ntBASIC14.87□□□□□ -0.03
TRAF3IP2O43734 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 KRT18P2-201ENST00000447938 1258 ntBASIC14.86□□□□□ -0.03
TRAF3IP2O43734 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 AC018845.2-201ENST00000568326 409 ntBASIC14.86□□□□□ -0.03
TRAF3IP2O43734 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 AC023141.13-201ENST00000604991 943 ntBASIC14.86□□□□□ -0.03
TRAF3IP2O43734 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF3IP2O43734 ALOX12P2-203ENST00000570921 1945 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms