Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 AP000350.6-201ENST00000609510 5637 ntBASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CHKB-CPT1BH3BT56 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 HLA-J-201ENST00000462773 1622 ntBASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 KRT18P68-201ENST00000392293 1000 ntBASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 MPST-208ENST00000628507 698 ntTSL 5 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 GSN-203ENST00000373808 2664 ntTSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHKB-CPT1BH3BT56 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 HERC2P9-206ENST00000529624 5187 ntBASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 LINC00528-201ENST00000600723 2160 ntBASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 AP002008.2-201ENST00000635926 4870 ntBASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHKB-CPT1BH3BT56 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms