RNA–Protein interactions for RNA: ENST00000305253.8

TUB-202, Transcript of tubby bipartite transcription factor, humanhuman

TSL 1 (best) BASIC

Gene TUB, Length 6,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUB-202ENST00000305253 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
TUB-202ENST00000305253 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
TUB-202ENST00000305253 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
TUB-202ENST00000305253 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
TUB-202ENST00000305253 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
TUB-202ENST00000305253 APLP2Q06481 763 aa18.74■□□□□ 0.59
TUB-202ENST00000305253 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
TUB-202ENST00000305253 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
TUB-202ENST00000305253 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
TUB-202ENST00000305253 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
TUB-202ENST00000305253 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
TUB-202ENST00000305253 MYT1LQ9UL68 1186 aa18.07■□□□□ 0.48
TUB-202ENST00000305253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
TUB-202ENST00000305253 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
TUB-202ENST00000305253 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
TUB-202ENST00000305253 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
TUB-202ENST00000305253 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
TUB-202ENST00000305253 ERICH6Q7L0X2 663 aa17.71■□□□□ 0.43
TUB-202ENST00000305253 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
TUB-202ENST00000305253 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
TUB-202ENST00000305253 POLR3GLQ9BT43 218 aa17.49■□□□□ 0.39
TUB-202ENST00000305253 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
TUB-202ENST00000305253 NEFLP07196 543 aa17.37■□□□□ 0.37
TUB-202ENST00000305253 ITGAEP38570 1179 aa17.34■□□□□ 0.37
TUB-202ENST00000305253 CENPBP07199 599 aaPredicted RBP17.31■□□□□ 0.36
TUB-202ENST00000305253 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.35
TUB-202ENST00000305253 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
TUB-202ENST00000305253 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
TUB-202ENST00000305253 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
TUB-202ENST00000305253 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
TUB-202ENST00000305253 FBLN2P98095 1184 aa17.09■□□□□ 0.33
TUB-202ENST00000305253 BCANQ96GW7 911 aa17.07■□□□□ 0.32
TUB-202ENST00000305253 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
TUB-202ENST00000305253 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
TUB-202ENST00000305253 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
TUB-202ENST00000305253 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
TUB-202ENST00000305253 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
TUB-202ENST00000305253 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
TUB-202ENST00000305253 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
TUB-202ENST00000305253 MYT1Q01538 1121 aa16.74■□□□□ 0.27
TUB-202ENST00000305253 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
TUB-202ENST00000305253 ABCC9O60706 1549 aa16.73■□□□□ 0.27
TUB-202ENST00000305253 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
TUB-202ENST00000305253 BCL11AQ9H165 835 aa16.7■□□□□ 0.26
TUB-202ENST00000305253 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
TUB-202ENST00000305253 ARID3CA6NKF2 412 aa16.65■□□□□ 0.26
TUB-202ENST00000305253 NEFMP07197 916 aa16.64■□□□□ 0.25
TUB-202ENST00000305253 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
TUB-202ENST00000305253 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
TUB-202ENST00000305253 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
TUB-202ENST00000305253 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
TUB-202ENST00000305253 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
TUB-202ENST00000305253 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
TUB-202ENST00000305253 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
TUB-202ENST00000305253 A0A0G2JS52 829 aa16.48■□□□□ 0.23
TUB-202ENST00000305253 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
TUB-202ENST00000305253 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
TUB-202ENST00000305253 P3H3Q8IVL6 736 aa16.44■□□□□ 0.22
TUB-202ENST00000305253 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
TUB-202ENST00000305253 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.21
TUB-202ENST00000305253 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
TUB-202ENST00000305253 ZBTB7CA1YPR0 619 aa16.23■□□□□ 0.19
TUB-202ENST00000305253 C14orf37Q86TY3 774 aa16.23■□□□□ 0.19
TUB-202ENST00000305253 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
TUB-202ENST00000305253 HRCP23327 699 aa16.22■□□□□ 0.19
TUB-202ENST00000305253 ANP32CO43423 234 aa16.21■□□□□ 0.19
TUB-202ENST00000305253 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
TUB-202ENST00000305253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
TUB-202ENST00000305253 ARID4BQ4LE39 1312 aaPredicted RBP16.15■□□□□ 0.18
TUB-202ENST00000305253 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
TUB-202ENST00000305253 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.17
TUB-202ENST00000305253 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
TUB-202ENST00000305253 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
TUB-202ENST00000305253 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
TUB-202ENST00000305253 ARXQ96QS3 562 aa16■□□□□ 0.15
TUB-202ENST00000305253 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
TUB-202ENST00000305253 HSP90AA1P07900 732 aaKnown RBP15.96■□□□□ 0.15
TUB-202ENST00000305253 TSPY4P0CV99 314 aa15.93■□□□□ 0.14
TUB-202ENST00000305253 TSPY10P0CW01 314 aa15.93■□□□□ 0.14
TUB-202ENST00000305253 NPHP1O15259 732 aa15.92■□□□□ 0.14
TUB-202ENST00000305253 CDK11BP21127 795 aaKnown RBP15.92■□□□□ 0.14
TUB-202ENST00000305253 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
TUB-202ENST00000305253 LMOD2Q6P5Q4 547 aa15.9■□□□□ 0.14
TUB-202ENST00000305253 KDM2AQ9Y2K7 1162 aa15.87■□□□□ 0.13
TUB-202ENST00000305253 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
TUB-202ENST00000305253 SALL2Q9Y467 1007 aaPredicted RBP15.86■□□□□ 0.13
TUB-202ENST00000305253 TULP1O00294 542 aaPredicted RBP15.81■□□□□ 0.12
TUB-202ENST00000305253 TONSLQ96HA7 1378 aa15.81■□□□□ 0.12
TUB-202ENST00000305253 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
TUB-202ENST00000305253 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.12
TUB-202ENST00000305253 UPF2Q9HAU5 1272 aaKnown RBP15.79■□□□□ 0.12
TUB-202ENST00000305253 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
TUB-202ENST00000305253 MYH16Q9H6N6 1097 aa15.75■□□□□ 0.11
TUB-202ENST00000305253 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
TUB-202ENST00000305253 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
TUB-202ENST00000305253 FAM9BQ8IZU0 186 aa15.71■□□□□ 0.11
TUB-202ENST00000305253 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.7■□□□□ 0.1
TUB-202ENST00000305253 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
TUB-202ENST00000305253 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
TUB-202ENST00000305253 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms