Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB6Q9Y5F9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB6Q9Y5F9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB6Q9Y5F9 AP004609.3-201ENST00000610705 1884 ntBASIC22.39■■□□□ 1.17
PCDHGB6Q9Y5F9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB6Q9Y5F9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB6Q9Y5F9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB6Q9Y5F9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PCDHGB6Q9Y5F9 BHLHE23-202ENST00000612929 1109 ntBASIC22.36■■□□□ 1.17
PCDHGB6Q9Y5F9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGB6Q9Y5F9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB6Q9Y5F9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGB6Q9Y5F9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB6Q9Y5F9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 AC145676.1-201ENST00000514988 2004 ntBASIC22.35■■□□□ 1.17
PCDHGB6Q9Y5F9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 AC139795.1-202ENST00000500444 432 ntBASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB6Q9Y5F9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDHGB6Q9Y5F9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB6Q9Y5F9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB6Q9Y5F9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB6Q9Y5F9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB6Q9Y5F9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGB6Q9Y5F9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHGB6Q9Y5F9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB6Q9Y5F9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB6Q9Y5F9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB6Q9Y5F9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 AC010980.1-201ENST00000587192 1142 ntBASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB6Q9Y5F9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB6Q9Y5F9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB6Q9Y5F9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB6Q9Y5F9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms