Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KDM3AQ9Y4C1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KDM3AQ9Y4C1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.99■■□□□ 1.91
KDM3AQ9Y4C1 AC096887.2-201ENST00000623443 1957 ntBASIC26.99■■□□□ 1.91
KDM3AQ9Y4C1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.98■■□□□ 1.91
KDM3AQ9Y4C1 AC018755.3-202ENST00000596210 929 ntBASIC26.98■■□□□ 1.91
KDM3AQ9Y4C1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.98■■□□□ 1.91
KDM3AQ9Y4C1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
KDM3AQ9Y4C1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
KDM3AQ9Y4C1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
KDM3AQ9Y4C1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
KDM3AQ9Y4C1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.96■■□□□ 1.91
KDM3AQ9Y4C1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.96■■□□□ 1.91
KDM3AQ9Y4C1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
KDM3AQ9Y4C1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
KDM3AQ9Y4C1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
KDM3AQ9Y4C1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.95■■□□□ 1.91
KDM3AQ9Y4C1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
KDM3AQ9Y4C1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.95■■□□□ 1.9
KDM3AQ9Y4C1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
KDM3AQ9Y4C1 AC010980.1-201ENST00000587192 1142 ntBASIC26.94■■□□□ 1.9
KDM3AQ9Y4C1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.94■■□□□ 1.9
KDM3AQ9Y4C1 BHLHE23-202ENST00000612929 1109 ntBASIC26.94■■□□□ 1.9
KDM3AQ9Y4C1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KDM3AQ9Y4C1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
KDM3AQ9Y4C1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
KDM3AQ9Y4C1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KDM3AQ9Y4C1 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.93■■□□□ 1.9
KDM3AQ9Y4C1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.93■■□□□ 1.9
KDM3AQ9Y4C1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.92■■□□□ 1.9
KDM3AQ9Y4C1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.92■■□□□ 1.9
KDM3AQ9Y4C1 AC139795.1-202ENST00000500444 432 ntBASIC26.92■■□□□ 1.9
KDM3AQ9Y4C1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.92■■□□□ 1.9
KDM3AQ9Y4C1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
KDM3AQ9Y4C1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.91■■□□□ 1.9
KDM3AQ9Y4C1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 AL451085.2-201ENST00000605085 799 ntBASIC26.9■■□□□ 1.9
KDM3AQ9Y4C1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.89■■□□□ 1.9
KDM3AQ9Y4C1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KDM3AQ9Y4C1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
KDM3AQ9Y4C1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KDM3AQ9Y4C1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.89■■□□□ 1.89
KDM3AQ9Y4C1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.89■■□□□ 1.89
KDM3AQ9Y4C1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM3AQ9Y4C1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.88■■□□□ 1.89
KDM3AQ9Y4C1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM3AQ9Y4C1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
KDM3AQ9Y4C1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM3AQ9Y4C1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
KDM3AQ9Y4C1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.88■■□□□ 1.89
KDM3AQ9Y4C1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 PVT1_1.1-201ENST00000615125 194 ntBASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 AL035685.1-201ENST00000636663 812 ntBASIC26.87■■□□□ 1.89
KDM3AQ9Y4C1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 AC103834.1-201ENST00000520383 144 ntBASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM3AQ9Y4C1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
KDM3AQ9Y4C1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 KRT18P10-201ENST00000388836 1287 ntBASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KDM3AQ9Y4C1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms