Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.74■□□□□ 0.75
CALYQ9NYX4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.74■□□□□ 0.75
CALYQ9NYX4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CALYQ9NYX4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CALYQ9NYX4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.73■□□□□ 0.75
CALYQ9NYX4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALYQ9NYX4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CALYQ9NYX4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALYQ9NYX4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALYQ9NYX4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALYQ9NYX4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CALYQ9NYX4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALYQ9NYX4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CALYQ9NYX4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CALYQ9NYX4 AC009831.1-201ENST00000580420 1582 ntBASIC19.72■□□□□ 0.75
CALYQ9NYX4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.72■□□□□ 0.75
CALYQ9NYX4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALYQ9NYX4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALYQ9NYX4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
CALYQ9NYX4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.71■□□□□ 0.75
CALYQ9NYX4 RARRES2P2-201ENST00000394842 485 ntBASIC19.71■□□□□ 0.75
CALYQ9NYX4 AC133552.2-201ENST00000619106 1032 ntBASIC19.71■□□□□ 0.75
CALYQ9NYX4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CALYQ9NYX4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALYQ9NYX4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.71■□□□□ 0.75
CALYQ9NYX4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALYQ9NYX4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CALYQ9NYX4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALYQ9NYX4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALYQ9NYX4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CALYQ9NYX4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.7■□□□□ 0.74
CALYQ9NYX4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALYQ9NYX4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALYQ9NYX4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CALYQ9NYX4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALYQ9NYX4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.7■□□□□ 0.74
CALYQ9NYX4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALYQ9NYX4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CALYQ9NYX4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.69■□□□□ 0.74
CALYQ9NYX4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALYQ9NYX4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
CALYQ9NYX4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALYQ9NYX4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CALYQ9NYX4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALYQ9NYX4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.68■□□□□ 0.74
CALYQ9NYX4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALYQ9NYX4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.67■□□□□ 0.74
CALYQ9NYX4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALYQ9NYX4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALYQ9NYX4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALYQ9NYX4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CALYQ9NYX4 AC142381.3-201ENST00000568208 1670 ntBASIC19.66■□□□□ 0.74
CALYQ9NYX4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALYQ9NYX4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALYQ9NYX4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.66■□□□□ 0.74
CALYQ9NYX4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALYQ9NYX4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALYQ9NYX4 AC022211.4-201ENST00000625094 2161 ntBASIC19.66■□□□□ 0.74
CALYQ9NYX4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CALYQ9NYX4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CALYQ9NYX4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALYQ9NYX4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CALYQ9NYX4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CALYQ9NYX4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALYQ9NYX4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.65■□□□□ 0.74
CALYQ9NYX4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CALYQ9NYX4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALYQ9NYX4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALYQ9NYX4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALYQ9NYX4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CALYQ9NYX4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALYQ9NYX4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.64■□□□□ 0.73
CALYQ9NYX4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALYQ9NYX4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CALYQ9NYX4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CALYQ9NYX4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALYQ9NYX4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALYQ9NYX4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALYQ9NYX4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALYQ9NYX4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 KRT18P10-201ENST00000388836 1287 ntBASIC19.63■□□□□ 0.73
CALYQ9NYX4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
CALYQ9NYX4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CALYQ9NYX4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALYQ9NYX4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms