Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MKKSQ9NPJ1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.6■■□□□ 1.21
MKKSQ9NPJ1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
MKKSQ9NPJ1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.59■■□□□ 1.21
MKKSQ9NPJ1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
MKKSQ9NPJ1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.59■■□□□ 1.21
MKKSQ9NPJ1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.59■■□□□ 1.21
MKKSQ9NPJ1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MKKSQ9NPJ1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 LONRF2P2-201ENST00000439212 571 ntBASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 PVT1_1.1-201ENST00000615125 194 ntBASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
MKKSQ9NPJ1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
MKKSQ9NPJ1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
MKKSQ9NPJ1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
MKKSQ9NPJ1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 YBX1P4-201ENST00000392794 808 ntBASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MKKSQ9NPJ1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
MKKSQ9NPJ1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MKKSQ9NPJ1 MIR4508-201ENST00000584178 70 ntBASIC22.55■■□□□ 1.2
MKKSQ9NPJ1 KRT8P33-201ENST00000508125 1423 ntBASIC22.55■■□□□ 1.2
MKKSQ9NPJ1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MKKSQ9NPJ1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MKKSQ9NPJ1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MKKSQ9NPJ1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MKKSQ9NPJ1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MKKSQ9NPJ1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.54■■□□□ 1.2
MKKSQ9NPJ1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MKKSQ9NPJ1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.52■■□□□ 1.2
MKKSQ9NPJ1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MKKSQ9NPJ1 AC103834.1-201ENST00000520383 144 ntBASIC22.52■■□□□ 1.2
MKKSQ9NPJ1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MKKSQ9NPJ1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MKKSQ9NPJ1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.51■■□□□ 1.19
MKKSQ9NPJ1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MKKSQ9NPJ1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MKKSQ9NPJ1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MKKSQ9NPJ1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MKKSQ9NPJ1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MKKSQ9NPJ1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MKKSQ9NPJ1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.48■■□□□ 1.19
MKKSQ9NPJ1 AC022616.5-201ENST00000518796 181 ntBASIC22.48■■□□□ 1.19
MKKSQ9NPJ1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.48■■□□□ 1.19
MKKSQ9NPJ1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.47■■□□□ 1.19
MKKSQ9NPJ1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MKKSQ9NPJ1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MKKSQ9NPJ1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
MKKSQ9NPJ1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.47■■□□□ 1.19
MKKSQ9NPJ1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.47■■□□□ 1.19
MKKSQ9NPJ1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms