Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATXN3LQ9H3M9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.17■■□□□ 1.62
ATXN3LQ9H3M9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.17■■□□□ 1.62
ATXN3LQ9H3M9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATXN3LQ9H3M9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATXN3LQ9H3M9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATXN3LQ9H3M9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATXN3LQ9H3M9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.16■■□□□ 1.62
ATXN3LQ9H3M9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATXN3LQ9H3M9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
ATXN3LQ9H3M9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ATXN3LQ9H3M9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
ATXN3LQ9H3M9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
ATXN3LQ9H3M9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
ATXN3LQ9H3M9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
ATXN3LQ9H3M9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.14■■□□□ 1.62
ATXN3LQ9H3M9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.14■■□□□ 1.62
ATXN3LQ9H3M9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ATXN3LQ9H3M9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ATXN3LQ9H3M9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.13■■□□□ 1.61
ATXN3LQ9H3M9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ATXN3LQ9H3M9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.13■■□□□ 1.61
ATXN3LQ9H3M9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
ATXN3LQ9H3M9 AC239859.2-201ENST00000444165 318 ntBASIC25.13■■□□□ 1.61
ATXN3LQ9H3M9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATXN3LQ9H3M9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATXN3LQ9H3M9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATXN3LQ9H3M9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.12■■□□□ 1.61
ATXN3LQ9H3M9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.12■■□□□ 1.61
ATXN3LQ9H3M9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.12■■□□□ 1.61
ATXN3LQ9H3M9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.12■■□□□ 1.61
ATXN3LQ9H3M9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.12■■□□□ 1.61
ATXN3LQ9H3M9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATXN3LQ9H3M9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 AC022616.5-201ENST00000518796 181 ntBASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
ATXN3LQ9H3M9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.1■■□□□ 1.61
ATXN3LQ9H3M9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
ATXN3LQ9H3M9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 AC131212.1-201ENST00000613771 668 ntBASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
ATXN3LQ9H3M9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.08■■□□□ 1.61
ATXN3LQ9H3M9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 Z92544.1-202ENST00000571933 1220 ntBASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 THA1P-201ENST00000590384 1145 ntBASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.07■■□□□ 1.6
ATXN3LQ9H3M9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ATXN3LQ9H3M9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.06■■□□□ 1.6
ATXN3LQ9H3M9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.06■■□□□ 1.6
ATXN3LQ9H3M9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.05■■□□□ 1.6
ATXN3LQ9H3M9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATXN3LQ9H3M9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATXN3LQ9H3M9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 AL356441.2-201ENST00000443009 864 ntBASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ATXN3LQ9H3M9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATXN3LQ9H3M9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ATXN3LQ9H3M9 KRT18P24-201ENST00000344739 1156 ntBASIC25.02■■□□□ 1.6
ATXN3LQ9H3M9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ATXN3LQ9H3M9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
ATXN3LQ9H3M9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms