Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.89■■□□□ 1.73
CDH23Q9H251 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDH23Q9H251 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDH23Q9H251 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
CDH23Q9H251 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDH23Q9H251 ABCB10P1-201ENST00000614297 2181 ntBASIC25.87■■□□□ 1.73
CDH23Q9H251 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDH23Q9H251 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDH23Q9H251 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.87■■□□□ 1.73
CDH23Q9H251 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDH23Q9H251 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDH23Q9H251 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDH23Q9H251 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDH23Q9H251 AC120024.1-201ENST00000562672 995 ntBASIC25.87■■□□□ 1.73
CDH23Q9H251 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.87■■□□□ 1.73
CDH23Q9H251 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDH23Q9H251 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.86■■□□□ 1.73
CDH23Q9H251 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDH23Q9H251 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.86■■□□□ 1.73
CDH23Q9H251 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.86■■□□□ 1.73
CDH23Q9H251 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.85■■□□□ 1.73
CDH23Q9H251 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDH23Q9H251 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
CDH23Q9H251 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDH23Q9H251 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.85■■□□□ 1.73
CDH23Q9H251 AC010997.5-201ENST00000609182 354 ntBASIC25.85■■□□□ 1.73
CDH23Q9H251 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDH23Q9H251 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CDH23Q9H251 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.84■■□□□ 1.73
CDH23Q9H251 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
CDH23Q9H251 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDH23Q9H251 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDH23Q9H251 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDH23Q9H251 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CDH23Q9H251 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CDH23Q9H251 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.84■■□□□ 1.73
CDH23Q9H251 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.84■■□□□ 1.73
CDH23Q9H251 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.84■■□□□ 1.73
CDH23Q9H251 MIR6724-1-201ENST00000616420 92 ntBASIC25.84■■□□□ 1.73
CDH23Q9H251 MIR6724-2-201ENST00000616483 92 ntBASIC25.84■■□□□ 1.73
CDH23Q9H251 MIR6724-4-201ENST00000617390 92 ntBASIC25.84■■□□□ 1.73
CDH23Q9H251 MIR6724-3-201ENST00000622482 92 ntBASIC25.84■■□□□ 1.73
CDH23Q9H251 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
CDH23Q9H251 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDH23Q9H251 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDH23Q9H251 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDH23Q9H251 AC139426.1-201ENST00000568218 2529 ntBASIC25.83■■□□□ 1.73
CDH23Q9H251 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.82■■□□□ 1.72
CDH23Q9H251 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.81■■□□□ 1.72
CDH23Q9H251 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDH23Q9H251 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.81■■□□□ 1.72
CDH23Q9H251 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
CDH23Q9H251 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.81■■□□□ 1.72
CDH23Q9H251 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.81■■□□□ 1.72
CDH23Q9H251 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDH23Q9H251 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.8■■□□□ 1.72
CDH23Q9H251 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CDH23Q9H251 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
CDH23Q9H251 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDH23Q9H251 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.8■■□□□ 1.72
CDH23Q9H251 MIR4281-201ENST00000580852 62 ntBASIC25.8■■□□□ 1.72
CDH23Q9H251 AC087623.3-201ENST00000607047 1098 ntBASIC25.8■■□□□ 1.72
CDH23Q9H251 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDH23Q9H251 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.79■■□□□ 1.72
CDH23Q9H251 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CDH23Q9H251 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CDH23Q9H251 AL355001.2-201ENST00000620617 1191 ntBASIC25.79■■□□□ 1.72
CDH23Q9H251 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDH23Q9H251 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDH23Q9H251 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.78■■□□□ 1.72
CDH23Q9H251 PBX2P1-201ENST00000493219 1291 ntBASIC25.78■■□□□ 1.72
CDH23Q9H251 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.78■■□□□ 1.72
CDH23Q9H251 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CDH23Q9H251 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDH23Q9H251 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.78■■□□□ 1.72
CDH23Q9H251 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.78■■□□□ 1.72
CDH23Q9H251 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.77■■□□□ 1.72
CDH23Q9H251 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDH23Q9H251 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.77■■□□□ 1.72
CDH23Q9H251 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDH23Q9H251 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CDH23Q9H251 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDH23Q9H251 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
CDH23Q9H251 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.76■■□□□ 1.71
CDH23Q9H251 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDH23Q9H251 AL449106.1-201ENST00000608517 1980 ntBASIC25.75■■□□□ 1.71
CDH23Q9H251 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDH23Q9H251 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.75■■□□□ 1.71
CDH23Q9H251 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CDH23Q9H251 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDH23Q9H251 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CDH23Q9H251 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CDH23Q9H251 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDH23Q9H251 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDH23Q9H251 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
CDH23Q9H251 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDH23Q9H251 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDH23Q9H251 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.74■■□□□ 1.71
CDH23Q9H251 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDH23Q9H251 MTDHP2-201ENST00000601468 714 ntBASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 519.3 ms