Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXC2Q99958 MIR4281-201ENST00000580852 62 ntBASIC20.29■□□□□ 0.84
FOXC2Q99958 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXC2Q99958 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXC2Q99958 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXC2Q99958 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
FOXC2Q99958 AC142381.2-201ENST00000566120 298 ntBASIC20.28■□□□□ 0.84
FOXC2Q99958 AC106739.1-201ENST00000617035 715 ntBASIC20.28■□□□□ 0.84
FOXC2Q99958 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXC2Q99958 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXC2Q99958 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXC2Q99958 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXC2Q99958 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXC2Q99958 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXC2Q99958 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXC2Q99958 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.27■□□□□ 0.83
FOXC2Q99958 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXC2Q99958 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXC2Q99958 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXC2Q99958 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FOXC2Q99958 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXC2Q99958 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXC2Q99958 AL512631.2-201ENST00000604634 923 ntBASIC20.26■□□□□ 0.83
FOXC2Q99958 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXC2Q99958 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
FOXC2Q99958 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXC2Q99958 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXC2Q99958 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXC2Q99958 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXC2Q99958 AC135279.3-201ENST00000610945 1311 ntBASIC20.25■□□□□ 0.83
FOXC2Q99958 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXC2Q99958 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXC2Q99958 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXC2Q99958 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXC2Q99958 PBX2P1-201ENST00000493219 1291 ntBASIC20.24■□□□□ 0.83
FOXC2Q99958 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
FOXC2Q99958 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXC2Q99958 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXC2Q99958 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXC2Q99958 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXC2Q99958 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXC2Q99958 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXC2Q99958 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXC2Q99958 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXC2Q99958 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXC2Q99958 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXC2Q99958 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FOXC2Q99958 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXC2Q99958 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXC2Q99958 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXC2Q99958 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXC2Q99958 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXC2Q99958 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXC2Q99958 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXC2Q99958 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXC2Q99958 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXC2Q99958 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXC2Q99958 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.21■□□□□ 0.83
FOXC2Q99958 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXC2Q99958 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FOXC2Q99958 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXC2Q99958 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXC2Q99958 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXC2Q99958 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXC2Q99958 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FOXC2Q99958 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXC2Q99958 AL139393.2-201ENST00000608721 2025 ntBASIC20.2■□□□□ 0.82
FOXC2Q99958 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXC2Q99958 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXC2Q99958 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXC2Q99958 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
FOXC2Q99958 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXC2Q99958 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXC2Q99958 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXC2Q99958 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXC2Q99958 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXC2Q99958 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXC2Q99958 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FOXC2Q99958 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXC2Q99958 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FOXC2Q99958 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXC2Q99958 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXC2Q99958 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXC2Q99958 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXC2Q99958 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.17■□□□□ 0.82
FOXC2Q99958 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXC2Q99958 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FOXC2Q99958 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FOXC2Q99958 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXC2Q99958 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXC2Q99958 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXC2Q99958 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
FOXC2Q99958 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXC2Q99958 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXC2Q99958 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXC2Q99958 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXC2Q99958 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
FOXC2Q99958 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXC2Q99958 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXC2Q99958 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms