Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM9SF2Q99805 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM9SF2Q99805 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM9SF2Q99805 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM9SF2Q99805 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.94■■□□□ 1.1
TM9SF2Q99805 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TM9SF2Q99805 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TM9SF2Q99805 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TM9SF2Q99805 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TM9SF2Q99805 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TM9SF2Q99805 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TM9SF2Q99805 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.94■■□□□ 1.1
TM9SF2Q99805 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM9SF2Q99805 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TM9SF2Q99805 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM9SF2Q99805 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TM9SF2Q99805 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.93■■□□□ 1.1
TM9SF2Q99805 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TM9SF2Q99805 AL359504.2-201ENST00000605506 1601 ntBASIC21.93■■□□□ 1.1
TM9SF2Q99805 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TM9SF2Q99805 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 AC129492.7-201ENST00000622992 756 ntBASIC21.92■■□□□ 1.1
TM9SF2Q99805 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TM9SF2Q99805 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TM9SF2Q99805 RAP2CP1-202ENST00000605179 643 ntBASIC21.91■■□□□ 1.1
TM9SF2Q99805 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TM9SF2Q99805 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TM9SF2Q99805 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TM9SF2Q99805 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TM9SF2Q99805 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM9SF2Q99805 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM9SF2Q99805 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TM9SF2Q99805 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.9■■□□□ 1.1
TM9SF2Q99805 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TM9SF2Q99805 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TM9SF2Q99805 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TM9SF2Q99805 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.89■■□□□ 1.09
TM9SF2Q99805 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TM9SF2Q99805 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TM9SF2Q99805 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
TM9SF2Q99805 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.88■■□□□ 1.09
TM9SF2Q99805 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.88■■□□□ 1.09
TM9SF2Q99805 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TM9SF2Q99805 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM9SF2Q99805 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TM9SF2Q99805 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TM9SF2Q99805 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM9SF2Q99805 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TM9SF2Q99805 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.87■■□□□ 1.09
TM9SF2Q99805 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TM9SF2Q99805 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TM9SF2Q99805 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM9SF2Q99805 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TM9SF2Q99805 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM9SF2Q99805 ERN1-208ENST00000606895 2068 ntBASIC21.85■■□□□ 1.09
TM9SF2Q99805 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.85■■□□□ 1.09
TM9SF2Q99805 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TM9SF2Q99805 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.85■■□□□ 1.09
TM9SF2Q99805 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TM9SF2Q99805 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM9SF2Q99805 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TM9SF2Q99805 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM9SF2Q99805 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
TM9SF2Q99805 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.83■■□□□ 1.09
TM9SF2Q99805 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM9SF2Q99805 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF2Q99805 DUX4L18-201ENST00000553347 1267 ntBASIC21.82■■□□□ 1.08
TM9SF2Q99805 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.82■■□□□ 1.08
TM9SF2Q99805 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.82■■□□□ 1.08
TM9SF2Q99805 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.82■■□□□ 1.08
TM9SF2Q99805 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF2Q99805 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF2Q99805 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM9SF2Q99805 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF2Q99805 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.81■■□□□ 1.08
TM9SF2Q99805 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF2Q99805 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF2Q99805 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF2Q99805 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF2Q99805 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
TM9SF2Q99805 DUX4L9-201ENST00000449051 1259 ntBASIC21.81■■□□□ 1.08
TM9SF2Q99805 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.81■■□□□ 1.08
TM9SF2Q99805 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF2Q99805 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TM9SF2Q99805 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.8■■□□□ 1.08
TM9SF2Q99805 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF2Q99805 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.8■■□□□ 1.08
TM9SF2Q99805 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF2Q99805 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF2Q99805 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF2Q99805 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF2Q99805 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TM9SF2Q99805 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF2Q99805 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms