Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.31■■□□□ 1
LRRC46Q96FV0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.31■■□□□ 1
LRRC46Q96FV0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRC46Q96FV0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.31■■□□□ 1
LRRC46Q96FV0 AC131212.1-201ENST00000613771 668 ntBASIC21.31■■□□□ 1
LRRC46Q96FV0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LRRC46Q96FV0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
LRRC46Q96FV0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LRRC46Q96FV0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC46Q96FV0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC46Q96FV0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC46Q96FV0 GUSBP5-201ENST00000418136 578 ntBASIC21.3■■□□□ 1
LRRC46Q96FV0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.3■■□□□ 1
LRRC46Q96FV0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.3■■□□□ 1
LRRC46Q96FV0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRC46Q96FV0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC46Q96FV0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC46Q96FV0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC46Q96FV0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.29■■□□□ 1
LRRC46Q96FV0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LRRC46Q96FV0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC46Q96FV0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LRRC46Q96FV0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.28■■□□□ 1
LRRC46Q96FV0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LRRC46Q96FV0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 Z92544.1-202ENST00000571933 1220 ntBASIC21.28■■□□□ 1
LRRC46Q96FV0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC46Q96FV0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC46Q96FV0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC46Q96FV0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC46Q96FV0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC46Q96FV0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC46Q96FV0 LONRF2P2-201ENST00000439212 571 ntBASIC21.27■■□□□ 1
LRRC46Q96FV0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.27■■□□□ 1
LRRC46Q96FV0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.27■■□□□ 1
LRRC46Q96FV0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
LRRC46Q96FV0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
LRRC46Q96FV0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LRRC46Q96FV0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LRRC46Q96FV0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LRRC46Q96FV0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRC46Q96FV0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LRRC46Q96FV0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC46Q96FV0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC46Q96FV0 KRT125P-201ENST00000546827 989 ntBASIC21.25■□□□□ 0.99
LRRC46Q96FV0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC46Q96FV0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRC46Q96FV0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LRRC46Q96FV0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
LRRC46Q96FV0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC46Q96FV0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC46Q96FV0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC46Q96FV0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC46Q96FV0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC46Q96FV0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRC46Q96FV0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.22■□□□□ 0.99
LRRC46Q96FV0 BX664725.1-201ENST00000438252 379 ntBASIC21.22■□□□□ 0.99
LRRC46Q96FV0 AC239859.2-201ENST00000444165 318 ntBASIC21.22■□□□□ 0.99
LRRC46Q96FV0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC46Q96FV0 THA1P-201ENST00000590384 1145 ntBASIC21.22■□□□□ 0.99
LRRC46Q96FV0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LRRC46Q96FV0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRC46Q96FV0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LRRC46Q96FV0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC46Q96FV0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 AL449106.1-201ENST00000608517 1980 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms