Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP6NLQ92738 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP6NLQ92738 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
USP6NLQ92738 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP6NLQ92738 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
USP6NLQ92738 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.97
USP6NLQ92738 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
USP6NLQ92738 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
USP6NLQ92738 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.38■■□□□ 1.97
USP6NLQ92738 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.38■■□□□ 1.97
USP6NLQ92738 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP6NLQ92738 BX255925.1-201ENST00000566954 1854 ntBASIC27.38■■□□□ 1.97
USP6NLQ92738 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
USP6NLQ92738 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
USP6NLQ92738 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.37■■□□□ 1.97
USP6NLQ92738 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.37■■□□□ 1.97
USP6NLQ92738 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.37■■□□□ 1.97
USP6NLQ92738 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.37■■□□□ 1.97
USP6NLQ92738 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 MIR4281-201ENST00000580852 62 ntBASIC27.36■■□□□ 1.97
USP6NLQ92738 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
USP6NLQ92738 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP6NLQ92738 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
USP6NLQ92738 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
USP6NLQ92738 DRD5P2-201ENST00000421395 2012 ntBASIC27.35■■□□□ 1.97
USP6NLQ92738 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.35■■□□□ 1.97
USP6NLQ92738 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.35■■□□□ 1.97
USP6NLQ92738 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP6NLQ92738 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP6NLQ92738 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.34■■□□□ 1.97
USP6NLQ92738 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
USP6NLQ92738 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP6NLQ92738 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.33■■□□□ 1.97
USP6NLQ92738 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.33■■□□□ 1.97
USP6NLQ92738 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
USP6NLQ92738 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP6NLQ92738 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP6NLQ92738 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.32■■□□□ 1.96
USP6NLQ92738 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.32■■□□□ 1.96
USP6NLQ92738 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 LINC01003-201ENST00000564834 1764 ntBASIC27.32■■□□□ 1.96
USP6NLQ92738 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6NLQ92738 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP6NLQ92738 AL117332.1-201ENST00000622628 974 ntBASIC27.31■■□□□ 1.96
USP6NLQ92738 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 MIR3621-201ENST00000580529 85 ntBASIC27.3■■□□□ 1.96
USP6NLQ92738 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6NLQ92738 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
USP6NLQ92738 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.3■■□□□ 1.96
USP6NLQ92738 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
USP6NLQ92738 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.29■■□□□ 1.96
USP6NLQ92738 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP6NLQ92738 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP6NLQ92738 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP6NLQ92738 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
USP6NLQ92738 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.28■■□□□ 1.96
USP6NLQ92738 AL136116.3-201ENST00000402907 1138 ntBASIC27.28■■□□□ 1.96
USP6NLQ92738 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.28■■□□□ 1.96
USP6NLQ92738 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP6NLQ92738 AC142472.1-201ENST00000612013 1741 ntBASIC27.27■■□□□ 1.96
USP6NLQ92738 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
USP6NLQ92738 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP6NLQ92738 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP6NLQ92738 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.27■■□□□ 1.96
USP6NLQ92738 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
USP6NLQ92738 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
USP6NLQ92738 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.26■■□□□ 1.95
USP6NLQ92738 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
USP6NLQ92738 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
USP6NLQ92738 AC010997.5-201ENST00000609182 354 ntBASIC27.26■■□□□ 1.95
USP6NLQ92738 AC110285.6-201ENST00000617652 491 ntBASIC27.26■■□□□ 1.95
USP6NLQ92738 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP6NLQ92738 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP6NLQ92738 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.25■■□□□ 1.95
USP6NLQ92738 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.25■■□□□ 1.95
USP6NLQ92738 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
USP6NLQ92738 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP6NLQ92738 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
USP6NLQ92738 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
USP6NLQ92738 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.24■■□□□ 1.95
USP6NLQ92738 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
USP6NLQ92738 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP6NLQ92738 MIR6724-1-201ENST00000616420 92 ntBASIC27.24■■□□□ 1.95
USP6NLQ92738 MIR6724-2-201ENST00000616483 92 ntBASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms