Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PHC3Q8NDX5 RAP2CP1-202ENST00000605179 643 ntBASIC23.73■■□□□ 1.39
PHC3Q8NDX5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PHC3Q8NDX5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.73■■□□□ 1.39
PHC3Q8NDX5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PHC3Q8NDX5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PHC3Q8NDX5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PHC3Q8NDX5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PHC3Q8NDX5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PHC3Q8NDX5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PHC3Q8NDX5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PHC3Q8NDX5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
PHC3Q8NDX5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PHC3Q8NDX5 AL592293.1-201ENST00000502889 1188 ntBASIC23.71■■□□□ 1.39
PHC3Q8NDX5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PHC3Q8NDX5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.7■■□□□ 1.39
PHC3Q8NDX5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PHC3Q8NDX5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PHC3Q8NDX5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PHC3Q8NDX5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PHC3Q8NDX5 KRT18P60-201ENST00000312876 1297 ntBASIC23.7■■□□□ 1.38
PHC3Q8NDX5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PHC3Q8NDX5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PHC3Q8NDX5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PHC3Q8NDX5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.69■■□□□ 1.38
PHC3Q8NDX5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PHC3Q8NDX5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PHC3Q8NDX5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PHC3Q8NDX5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PHC3Q8NDX5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PHC3Q8NDX5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PHC3Q8NDX5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.68■■□□□ 1.38
PHC3Q8NDX5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PHC3Q8NDX5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.68■■□□□ 1.38
PHC3Q8NDX5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PHC3Q8NDX5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.67■■□□□ 1.38
PHC3Q8NDX5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PHC3Q8NDX5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PHC3Q8NDX5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.65■■□□□ 1.38
PHC3Q8NDX5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PHC3Q8NDX5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.64■■□□□ 1.37
PHC3Q8NDX5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PHC3Q8NDX5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PHC3Q8NDX5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PHC3Q8NDX5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PHC3Q8NDX5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PHC3Q8NDX5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.63■■□□□ 1.37
PHC3Q8NDX5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PHC3Q8NDX5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PHC3Q8NDX5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PHC3Q8NDX5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PHC3Q8NDX5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PHC3Q8NDX5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.62■■□□□ 1.37
PHC3Q8NDX5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PHC3Q8NDX5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PHC3Q8NDX5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PHC3Q8NDX5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PHC3Q8NDX5 AC145676.1-201ENST00000514988 2004 ntBASIC23.62■■□□□ 1.37
PHC3Q8NDX5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PHC3Q8NDX5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.61■■□□□ 1.37
PHC3Q8NDX5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PHC3Q8NDX5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PHC3Q8NDX5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PHC3Q8NDX5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PHC3Q8NDX5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PHC3Q8NDX5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.59■■□□□ 1.37
PHC3Q8NDX5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.59■■□□□ 1.37
PHC3Q8NDX5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PHC3Q8NDX5 SPCS2P3-201ENST00000500401 656 ntBASIC23.59■■□□□ 1.37
PHC3Q8NDX5 AC129492.7-201ENST00000622992 756 ntBASIC23.59■■□□□ 1.37
PHC3Q8NDX5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PHC3Q8NDX5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms