Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC3Q7RTR2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC3Q7RTR2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC3Q7RTR2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC3Q7RTR2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.74■□□□□ 0.91
NLRC3Q7RTR2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC3Q7RTR2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC3Q7RTR2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NLRC3Q7RTR2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC3Q7RTR2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC3Q7RTR2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
NLRC3Q7RTR2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.7■□□□□ 0.9
NLRC3Q7RTR2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC3Q7RTR2 AC142381.3-201ENST00000568208 1670 ntBASIC20.7■□□□□ 0.9
NLRC3Q7RTR2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.7■□□□□ 0.9
NLRC3Q7RTR2 LINC00543-201ENST00000567234 1845 ntBASIC20.69■□□□□ 0.9
NLRC3Q7RTR2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC3Q7RTR2 AL139125.2-201ENST00000623134 1869 ntBASIC20.69■□□□□ 0.9
NLRC3Q7RTR2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC3Q7RTR2 ECEL1P2-201ENST00000461596 1295 ntBASIC20.68■□□□□ 0.9
NLRC3Q7RTR2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC3Q7RTR2 AC092296.2-201ENST00000589470 999 ntBASIC20.68■□□□□ 0.9
NLRC3Q7RTR2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC3Q7RTR2 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.67■□□□□ 0.9
NLRC3Q7RTR2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC3Q7RTR2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC3Q7RTR2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC3Q7RTR2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC3Q7RTR2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC3Q7RTR2 AC079834.2-201ENST00000609776 1949 ntBASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC3Q7RTR2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC3Q7RTR2 AC068473.5-201ENST00000616428 2072 ntBASIC20.65■□□□□ 0.9
NLRC3Q7RTR2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC3Q7RTR2 WHAMMP3-201ENST00000611636 1609 ntBASIC20.65■□□□□ 0.9
NLRC3Q7RTR2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC3Q7RTR2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC3Q7RTR2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NLRC3Q7RTR2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.64■□□□□ 0.9
NLRC3Q7RTR2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.64■□□□□ 0.9
NLRC3Q7RTR2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC3Q7RTR2 ABHD17AP5-201ENST00000580133 923 ntBASIC20.64■□□□□ 0.89
NLRC3Q7RTR2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NLRC3Q7RTR2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NLRC3Q7RTR2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC3Q7RTR2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC3Q7RTR2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.63■□□□□ 0.89
NLRC3Q7RTR2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.63■□□□□ 0.89
NLRC3Q7RTR2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC3Q7RTR2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC3Q7RTR2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC3Q7RTR2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC3Q7RTR2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC3Q7RTR2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC3Q7RTR2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC3Q7RTR2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NLRC3Q7RTR2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NLRC3Q7RTR2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.6■□□□□ 0.89
NLRC3Q7RTR2 AL157400.5-201ENST00000507624 621 ntBASIC20.6■□□□□ 0.89
NLRC3Q7RTR2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLRC3Q7RTR2 CLDN5-201ENST00000403084 2357 ntBASIC20.6■□□□□ 0.89
NLRC3Q7RTR2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC3Q7RTR2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC3Q7RTR2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC3Q7RTR2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRC3Q7RTR2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms