Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
USP31Q70CQ4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.6■■■□□ 2.81
USP31Q70CQ4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
USP31Q70CQ4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
USP31Q70CQ4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
USP31Q70CQ4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC32.59■■■□□ 2.81
USP31Q70CQ4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
USP31Q70CQ4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 UNC93B8-201ENST00000511903 705 ntBASIC32.58■■■□□ 2.81
USP31Q70CQ4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
USP31Q70CQ4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
USP31Q70CQ4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
USP31Q70CQ4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
USP31Q70CQ4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC32.58■■■□□ 2.81
USP31Q70CQ4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.81
USP31Q70CQ4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.57■■■□□ 2.8
USP31Q70CQ4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
USP31Q70CQ4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
USP31Q70CQ4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
USP31Q70CQ4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
USP31Q70CQ4 KRT125P-201ENST00000546827 989 ntBASIC32.57■■■□□ 2.8
USP31Q70CQ4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
USP31Q70CQ4 AC021242.3-201ENST00000607598 1377 ntBASIC32.56■■■□□ 2.8
USP31Q70CQ4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC32.56■■■□□ 2.8
USP31Q70CQ4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
USP31Q70CQ4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC32.56■■■□□ 2.8
USP31Q70CQ4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.56■■■□□ 2.8
USP31Q70CQ4 GRAMD4P7-201ENST00000578182 1232 ntBASIC32.56■■■□□ 2.8
USP31Q70CQ4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.55■■■□□ 2.8
USP31Q70CQ4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.55■■■□□ 2.8
USP31Q70CQ4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
USP31Q70CQ4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.54■■■□□ 2.8
USP31Q70CQ4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC32.54■■■□□ 2.8
USP31Q70CQ4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32.54■■■□□ 2.8
USP31Q70CQ4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC32.53■■■□□ 2.8
USP31Q70CQ4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
USP31Q70CQ4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
USP31Q70CQ4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
USP31Q70CQ4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC32.52■■■□□ 2.8
USP31Q70CQ4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
USP31Q70CQ4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
USP31Q70CQ4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.8
USP31Q70CQ4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
USP31Q70CQ4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
USP31Q70CQ4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
USP31Q70CQ4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC32.5■■■□□ 2.79
USP31Q70CQ4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC32.5■■■□□ 2.79
USP31Q70CQ4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
USP31Q70CQ4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
USP31Q70CQ4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.49■■■□□ 2.79
USP31Q70CQ4 MIR4281-201ENST00000580852 62 ntBASIC32.49■■■□□ 2.79
USP31Q70CQ4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
USP31Q70CQ4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
USP31Q70CQ4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
USP31Q70CQ4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC32.48■■■□□ 2.79
USP31Q70CQ4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.48■■■□□ 2.79
USP31Q70CQ4 AC019069.1-201ENST00000610008 1333 ntBASIC32.48■■■□□ 2.79
USP31Q70CQ4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
USP31Q70CQ4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
USP31Q70CQ4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.48■■■□□ 2.79
USP31Q70CQ4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.47■■■□□ 2.79
USP31Q70CQ4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
USP31Q70CQ4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
USP31Q70CQ4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
USP31Q70CQ4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
USP31Q70CQ4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.46■■■□□ 2.79
USP31Q70CQ4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
USP31Q70CQ4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
USP31Q70CQ4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC32.45■■■□□ 2.79
USP31Q70CQ4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.45■■■□□ 2.79
USP31Q70CQ4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
USP31Q70CQ4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
USP31Q70CQ4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
USP31Q70CQ4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.78
USP31Q70CQ4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC32.45■■■□□ 2.78
USP31Q70CQ4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
USP31Q70CQ4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
USP31Q70CQ4 KRT16P3-201ENST00000439127 1283 ntBASIC32.43■■■□□ 2.78
USP31Q70CQ4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.43■■■□□ 2.78
USP31Q70CQ4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
USP31Q70CQ4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
USP31Q70CQ4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.42■■■□□ 2.78
USP31Q70CQ4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
USP31Q70CQ4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC32.41■■■□□ 2.78
USP31Q70CQ4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC32.41■■■□□ 2.78
USP31Q70CQ4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
USP31Q70CQ4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
USP31Q70CQ4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.4■■■□□ 2.78
USP31Q70CQ4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC32.4■■■□□ 2.78
USP31Q70CQ4 AC011551.1-201ENST00000614101 683 ntBASIC32.4■■■□□ 2.78
USP31Q70CQ4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC32.39■■■□□ 2.78
USP31Q70CQ4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
USP31Q70CQ4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
USP31Q70CQ4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.38■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms