Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.73■■■□□ 2.03
CCDC144BQ3MJ40 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CCDC144BQ3MJ40 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
CCDC144BQ3MJ40 AC145676.1-201ENST00000514988 2004 ntBASIC27.72■■■□□ 2.03
CCDC144BQ3MJ40 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CCDC144BQ3MJ40 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CCDC144BQ3MJ40 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CCDC144BQ3MJ40 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
CCDC144BQ3MJ40 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
CCDC144BQ3MJ40 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
CCDC144BQ3MJ40 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CCDC144BQ3MJ40 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
CCDC144BQ3MJ40 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.7■■■□□ 2.03
CCDC144BQ3MJ40 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.03
CCDC144BQ3MJ40 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
CCDC144BQ3MJ40 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CCDC144BQ3MJ40 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.68■■■□□ 2.02
CCDC144BQ3MJ40 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.68■■■□□ 2.02
CCDC144BQ3MJ40 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CCDC144BQ3MJ40 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.68■■■□□ 2.02
CCDC144BQ3MJ40 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.67■■■□□ 2.02
CCDC144BQ3MJ40 AC103724.3-201ENST00000564481 992 ntBASIC27.66■■■□□ 2.02
CCDC144BQ3MJ40 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.66■■■□□ 2.02
CCDC144BQ3MJ40 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.66■■■□□ 2.02
CCDC144BQ3MJ40 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
CCDC144BQ3MJ40 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.65■■■□□ 2.02
CCDC144BQ3MJ40 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.65■■■□□ 2.02
CCDC144BQ3MJ40 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
CCDC144BQ3MJ40 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
CCDC144BQ3MJ40 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CCDC144BQ3MJ40 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CCDC144BQ3MJ40 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
CCDC144BQ3MJ40 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CCDC144BQ3MJ40 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
CCDC144BQ3MJ40 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.64■■■□□ 2.01
CCDC144BQ3MJ40 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.63■■■□□ 2.01
CCDC144BQ3MJ40 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CCDC144BQ3MJ40 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.63■■■□□ 2.01
CCDC144BQ3MJ40 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CCDC144BQ3MJ40 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
CCDC144BQ3MJ40 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
CCDC144BQ3MJ40 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
CCDC144BQ3MJ40 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCDC144BQ3MJ40 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CCDC144BQ3MJ40 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.62■■■□□ 2.01
CCDC144BQ3MJ40 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 AL592295.1-201ENST00000400984 884 ntBASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 GUSBP5-201ENST00000418136 578 ntBASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 AL031848.2-201ENST00000607670 837 ntBASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
CCDC144BQ3MJ40 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCDC144BQ3MJ40 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CCDC144BQ3MJ40 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
CCDC144BQ3MJ40 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.6■■■□□ 2.01
CCDC144BQ3MJ40 AC087393.1-201ENST00000582896 145 ntBASIC27.6■■■□□ 2.01
CCDC144BQ3MJ40 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CCDC144BQ3MJ40 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCDC144BQ3MJ40 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
CCDC144BQ3MJ40 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CCDC144BQ3MJ40 AC019171.1-201ENST00000601251 1056 ntBASIC27.59■■■□□ 2.01
CCDC144BQ3MJ40 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCDC144BQ3MJ40 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CCDC144BQ3MJ40 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CCDC144BQ3MJ40 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.58■■■□□ 2.01
CCDC144BQ3MJ40 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.58■■■□□ 2.01
CCDC144BQ3MJ40 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC144BQ3MJ40 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CCDC144BQ3MJ40 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
CCDC144BQ3MJ40 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC144BQ3MJ40 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCDC144BQ3MJ40 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC144BQ3MJ40 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.57■■■□□ 2
CCDC144BQ3MJ40 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC144BQ3MJ40 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.57■■■□□ 2
CCDC144BQ3MJ40 AC131212.1-201ENST00000613771 668 ntBASIC27.56■■■□□ 2
CCDC144BQ3MJ40 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
CCDC144BQ3MJ40 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.56■■■□□ 2
CCDC144BQ3MJ40 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CCDC144BQ3MJ40 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CCDC144BQ3MJ40 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms