Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DRB3P79483 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRB3P79483 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HLA-DRB3P79483 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRB3P79483 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DRB3P79483 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRB3P79483 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRB3P79483 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 AL157400.5-201ENST00000507624 621 ntBASIC19.89■□□□□ 0.77
HLA-DRB3P79483 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRB3P79483 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DRB3P79483 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRB3P79483 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRB3P79483 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRB3P79483 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HLA-DRB3P79483 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRB3P79483 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DRB3P79483 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB3P79483 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DRB3P79483 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DRB3P79483 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB3P79483 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DRB3P79483 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB3P79483 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DRB3P79483 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DRB3P79483 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 AC025884.2-201ENST00000553429 711 ntBASIC19.84■□□□□ 0.77
HLA-DRB3P79483 AC060814.1-201ENST00000554326 538 ntBASIC19.84■□□□□ 0.77
HLA-DRB3P79483 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DRB3P79483 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DRB3P79483 MIR3960-201ENST00000583311 91 ntBASIC19.83■□□□□ 0.77
HLA-DRB3P79483 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DRB3P79483 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 AP003733.4-201ENST00000623785 1697 ntBASIC19.82■□□□□ 0.76
HLA-DRB3P79483 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DRB3P79483 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DRB3P79483 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB3P79483 SLC6A10P-202ENST00000431994 2058 ntBASIC19.8■□□□□ 0.76
HLA-DRB3P79483 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DRB3P79483 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DRB3P79483 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB3P79483 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB3P79483 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRB3P79483 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DRB3P79483 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms