Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PER3P56645 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PER3P56645 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PER3P56645 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PER3P56645 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PER3P56645 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PER3P56645 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PER3P56645 AC008406.3-201ENST00000620001 1374 ntBASIC21.93■■□□□ 1.1
PER3P56645 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PER3P56645 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PER3P56645 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.92■■□□□ 1.1
PER3P56645 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PER3P56645 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PER3P56645 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.92■■□□□ 1.1
PER3P56645 AL359504.2-201ENST00000605506 1601 ntBASIC21.91■■□□□ 1.1
PER3P56645 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PER3P56645 Z92544.1-202ENST00000571933 1220 ntBASIC21.91■■□□□ 1.1
PER3P56645 AC019171.1-201ENST00000601251 1056 ntBASIC21.91■■□□□ 1.1
PER3P56645 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.91■■□□□ 1.1
PER3P56645 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PER3P56645 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PER3P56645 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.9■■□□□ 1.1
PER3P56645 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PER3P56645 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PER3P56645 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.9■■□□□ 1.1
PER3P56645 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.9■■□□□ 1.1
PER3P56645 MIR935-201ENST00000401179 91 ntBASIC21.9■■□□□ 1.1
PER3P56645 AC239859.2-201ENST00000444165 318 ntBASIC21.9■■□□□ 1.1
PER3P56645 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.9■■□□□ 1.1
PER3P56645 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PER3P56645 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PER3P56645 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PER3P56645 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
PER3P56645 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PER3P56645 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PER3P56645 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
PER3P56645 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.89■■□□□ 1.09
PER3P56645 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PER3P56645 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PER3P56645 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PER3P56645 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PER3P56645 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PER3P56645 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PER3P56645 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.88■■□□□ 1.09
PER3P56645 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PER3P56645 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.88■■□□□ 1.09
PER3P56645 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PER3P56645 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
PER3P56645 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PER3P56645 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
PER3P56645 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PER3P56645 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PER3P56645 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.86■■□□□ 1.09
PER3P56645 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.86■■□□□ 1.09
PER3P56645 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PER3P56645 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PER3P56645 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.85■■□□□ 1.09
PER3P56645 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
PER3P56645 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PER3P56645 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PER3P56645 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PER3P56645 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PER3P56645 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PER3P56645 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PER3P56645 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PER3P56645 KRT125P-201ENST00000546827 989 ntBASIC21.84■■□□□ 1.09
PER3P56645 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.84■■□□□ 1.09
PER3P56645 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.83■■□□□ 1.09
PER3P56645 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.83■■□□□ 1.09
PER3P56645 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.83■■□□□ 1.09
PER3P56645 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.83■■□□□ 1.09
PER3P56645 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.83■■□□□ 1.09
PER3P56645 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.83■■□□□ 1.09
PER3P56645 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PER3P56645 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PER3P56645 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PER3P56645 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.82■■□□□ 1.08
PER3P56645 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PER3P56645 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PER3P56645 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PER3P56645 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.82■■□□□ 1.08
PER3P56645 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.82■■□□□ 1.08
PER3P56645 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.82■■□□□ 1.08
PER3P56645 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PER3P56645 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PER3P56645 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PER3P56645 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.81■■□□□ 1.08
PER3P56645 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PER3P56645 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PER3P56645 LINC01003-201ENST00000564834 1764 ntBASIC21.81■■□□□ 1.08
PER3P56645 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.8■■□□□ 1.08
PER3P56645 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms