Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EFNB2P52799 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.6■□□□□ 0.89
EFNB2P52799 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB2P52799 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.59■□□□□ 0.89
EFNB2P52799 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.59■□□□□ 0.89
EFNB2P52799 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.59■□□□□ 0.89
EFNB2P52799 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
EFNB2P52799 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB2P52799 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB2P52799 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB2P52799 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB2P52799 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
EFNB2P52799 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
EFNB2P52799 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EFNB2P52799 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB2P52799 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB2P52799 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
EFNB2P52799 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.57■□□□□ 0.88
EFNB2P52799 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB2P52799 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB2P52799 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB2P52799 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB2P52799 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.56■□□□□ 0.88
EFNB2P52799 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.56■□□□□ 0.88
EFNB2P52799 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB2P52799 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB2P52799 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB2P52799 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.56■□□□□ 0.88
EFNB2P52799 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB2P52799 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB2P52799 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
EFNB2P52799 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB2P52799 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB2P52799 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.55■□□□□ 0.88
EFNB2P52799 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB2P52799 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB2P52799 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFNB2P52799 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EFNB2P52799 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.55■□□□□ 0.88
EFNB2P52799 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.55■□□□□ 0.88
EFNB2P52799 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.54■□□□□ 0.88
EFNB2P52799 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
EFNB2P52799 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.54■□□□□ 0.88
EFNB2P52799 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFNB2P52799 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB2P52799 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.53■□□□□ 0.88
EFNB2P52799 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB2P52799 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB2P52799 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB2P52799 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFNB2P52799 AL359504.2-201ENST00000605506 1601 ntBASIC20.53■□□□□ 0.88
EFNB2P52799 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
EFNB2P52799 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNB2P52799 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNB2P52799 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFNB2P52799 MIR219A2-201ENST00000608502 1504 ntBASIC20.52■□□□□ 0.87
EFNB2P52799 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.52■□□□□ 0.87
EFNB2P52799 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB2P52799 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB2P52799 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB2P52799 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB2P52799 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.51■□□□□ 0.87
EFNB2P52799 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.51■□□□□ 0.87
EFNB2P52799 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB2P52799 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EFNB2P52799 AP003733.4-201ENST00000623785 1697 ntBASIC20.51■□□□□ 0.87
EFNB2P52799 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
EFNB2P52799 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EFNB2P52799 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB2P52799 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB2P52799 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB2P52799 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB2P52799 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB2P52799 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB2P52799 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EFNB2P52799 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB2P52799 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB2P52799 SLC6A10P-202ENST00000431994 2058 ntBASIC20.49■□□□□ 0.87
EFNB2P52799 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB2P52799 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.49■□□□□ 0.87
EFNB2P52799 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB2P52799 HSD17B1P1-201ENST00000590052 955 ntBASIC20.49■□□□□ 0.87
EFNB2P52799 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB2P52799 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFNB2P52799 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFNB2P52799 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.48■□□□□ 0.87
EFNB2P52799 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EFNB2P52799 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EFNB2P52799 AL359258.2-201ENST00000564063 1566 ntBASIC20.47■□□□□ 0.87
EFNB2P52799 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EFNB2P52799 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EFNB2P52799 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EFNB2P52799 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.47■□□□□ 0.87
EFNB2P52799 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EFNB2P52799 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EFNB2P52799 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.47■□□□□ 0.87
EFNB2P52799 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFNB2P52799 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFNB2P52799 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.46■□□□□ 0.87
EFNB2P52799 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms