Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRP9P49458 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.03■□□□□ 0.96
SRP9P49458 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
SRP9P49458 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRP9P49458 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRP9P49458 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SRP9P49458 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.02■□□□□ 0.96
SRP9P49458 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SRP9P49458 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP9P49458 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SRP9P49458 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.02■□□□□ 0.96
SRP9P49458 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SRP9P49458 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.01■□□□□ 0.95
SRP9P49458 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP9P49458 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.01■□□□□ 0.95
SRP9P49458 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SRP9P49458 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRP9P49458 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.01■□□□□ 0.95
SRP9P49458 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP9P49458 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRP9P49458 GPX1-201ENST00000419349 1106 ntBASIC21.01■□□□□ 0.95
SRP9P49458 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.01■□□□□ 0.95
SRP9P49458 AC060814.1-201ENST00000554326 538 ntBASIC21.01■□□□□ 0.95
SRP9P49458 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP9P49458 AC138932.3-201ENST00000567634 1902 ntBASIC21.01■□□□□ 0.95
SRP9P49458 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.01■□□□□ 0.95
SRP9P49458 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP9P49458 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP9P49458 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRP9P49458 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21■□□□□ 0.95
SRP9P49458 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP9P49458 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP9P49458 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRP9P49458 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP9P49458 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP9P49458 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.99■□□□□ 0.95
SRP9P49458 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.99■□□□□ 0.95
SRP9P49458 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP9P49458 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SRP9P49458 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP9P49458 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP9P49458 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP9P49458 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP9P49458 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP9P49458 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.98■□□□□ 0.95
SRP9P49458 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP9P49458 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.98■□□□□ 0.95
SRP9P49458 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP9P49458 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.98■□□□□ 0.95
SRP9P49458 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP9P49458 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP9P49458 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRP9P49458 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SRP9P49458 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRP9P49458 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRP9P49458 AC022211.4-201ENST00000625094 2161 ntBASIC20.97■□□□□ 0.95
SRP9P49458 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRP9P49458 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.97■□□□□ 0.95
SRP9P49458 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.97■□□□□ 0.95
SRP9P49458 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRP9P49458 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRP9P49458 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRP9P49458 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRP9P49458 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.96■□□□□ 0.95
SRP9P49458 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.95■□□□□ 0.94
SRP9P49458 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SRP9P49458 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.95■□□□□ 0.94
SRP9P49458 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.95■□□□□ 0.94
SRP9P49458 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRP9P49458 AC142472.1-201ENST00000612013 1741 ntBASIC20.95■□□□□ 0.94
SRP9P49458 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SRP9P49458 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRP9P49458 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SRP9P49458 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
SRP9P49458 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP9P49458 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP9P49458 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP9P49458 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP9P49458 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP9P49458 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP9P49458 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRP9P49458 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRP9P49458 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.93■□□□□ 0.94
SRP9P49458 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRP9P49458 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP9P49458 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP9P49458 AC092296.2-201ENST00000589470 999 ntBASIC20.92■□□□□ 0.94
SRP9P49458 HSD17B1P1-201ENST00000590052 955 ntBASIC20.92■□□□□ 0.94
SRP9P49458 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP9P49458 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP9P49458 AC010501.1-201ENST00000606270 1962 ntBASIC20.92■□□□□ 0.94
SRP9P49458 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRP9P49458 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP9P49458 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRP9P49458 ECEL1P2-201ENST00000461596 1295 ntBASIC20.91■□□□□ 0.94
SRP9P49458 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRP9P49458 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP9P49458 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP9P49458 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP9P49458 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms