Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR6724-1-201ENST00000616420 92 ntBASIC25.65■■□□□ 1.7
RB1P06400 MIR6724-2-201ENST00000616483 92 ntBASIC25.65■■□□□ 1.7
RB1P06400 MIR6724-4-201ENST00000617390 92 ntBASIC25.65■■□□□ 1.7
RB1P06400 MIR6724-3-201ENST00000622482 92 ntBASIC25.65■■□□□ 1.7
RB1P06400 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RB1P06400 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RB1P06400 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RB1P06400 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
RB1P06400 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.64■■□□□ 1.7
RB1P06400 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.64■■□□□ 1.7
RB1P06400 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.64■■□□□ 1.69
RB1P06400 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RB1P06400 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RB1P06400 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RB1P06400 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.63■■□□□ 1.69
RB1P06400 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.63■■□□□ 1.69
RB1P06400 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RB1P06400 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RB1P06400 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RB1P06400 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
RB1P06400 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RB1P06400 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RB1P06400 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RB1P06400 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.62■■□□□ 1.69
RB1P06400 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RB1P06400 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
RB1P06400 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
RB1P06400 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RB1P06400 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
RB1P06400 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.61■■□□□ 1.69
RB1P06400 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RB1P06400 AL356740.2-201ENST00000601559 647 ntBASIC25.61■■□□□ 1.69
RB1P06400 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.61■■□□□ 1.69
RB1P06400 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
RB1P06400 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RB1P06400 BX255925.1-201ENST00000566954 1854 ntBASIC25.61■■□□□ 1.69
RB1P06400 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
RB1P06400 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RB1P06400 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RB1P06400 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
RB1P06400 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RB1P06400 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
RB1P06400 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RB1P06400 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RB1P06400 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RB1P06400 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RB1P06400 MTDHP2-201ENST00000601468 714 ntBASIC25.59■■□□□ 1.69
RB1P06400 AC110285.6-201ENST00000617652 491 ntBASIC25.59■■□□□ 1.69
RB1P06400 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.59■■□□□ 1.69
RB1P06400 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.59■■□□□ 1.69
RB1P06400 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.59■■□□□ 1.69
RB1P06400 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RB1P06400 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RB1P06400 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RB1P06400 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.58■■□□□ 1.69
RB1P06400 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RB1P06400 AC005837.3-201ENST00000612163 286 ntBASIC25.58■■□□□ 1.69
RB1P06400 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.58■■□□□ 1.69
RB1P06400 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
RB1P06400 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RB1P06400 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.58■■□□□ 1.69
RB1P06400 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RB1P06400 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RB1P06400 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
RB1P06400 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.57■■□□□ 1.68
RB1P06400 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.57■■□□□ 1.68
RB1P06400 AC011551.1-201ENST00000614101 683 ntBASIC25.57■■□□□ 1.68
RB1P06400 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.57■■□□□ 1.68
RB1P06400 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
RB1P06400 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.56■■□□□ 1.68
RB1P06400 AC133561.4-201ENST00000566112 224 ntBASIC25.56■■□□□ 1.68
RB1P06400 ABCB10P1-201ENST00000614297 2181 ntBASIC25.56■■□□□ 1.68
RB1P06400 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RB1P06400 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RB1P06400 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.55■■□□□ 1.68
RB1P06400 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RB1P06400 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RB1P06400 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.55■■□□□ 1.68
RB1P06400 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
RB1P06400 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.55■■□□□ 1.68
RB1P06400 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.54■■□□□ 1.68
RB1P06400 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.54■■□□□ 1.68
RB1P06400 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.54■■□□□ 1.68
RB1P06400 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RB1P06400 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.54■■□□□ 1.68
RB1P06400 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.54■■□□□ 1.68
RB1P06400 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
RB1P06400 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RB1P06400 AC096631.2-201ENST00000436136 790 ntBASIC25.53■■□□□ 1.68
RB1P06400 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RB1P06400 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RB1P06400 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RB1P06400 AC142472.1-201ENST00000612013 1741 ntBASIC25.52■■□□□ 1.68
RB1P06400 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
RB1P06400 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.52■■□□□ 1.68
RB1P06400 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.52■■□□□ 1.68
RB1P06400 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.52■■□□□ 1.68
RB1P06400 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RB1P06400 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RB1P06400 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms