Protein–RNA interactions for Protein: P01597

IGKV1-39, Immunoglobulin kappa variable 1-39, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39P01597 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGKV1-39P01597 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IGKV1-39P01597 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
IGKV1-39P01597 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV1-39P01597 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV1-39P01597 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.4■□□□□ 0.7
IGKV1-39P01597 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV1-39P01597 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV1-39P01597 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.4■□□□□ 0.7
IGKV1-39P01597 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV1-39P01597 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.39■□□□□ 0.7
IGKV1-39P01597 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV1-39P01597 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV1-39P01597 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.39■□□□□ 0.69
IGKV1-39P01597 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
IGKV1-39P01597 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.39■□□□□ 0.69
IGKV1-39P01597 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV1-39P01597 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
IGKV1-39P01597 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV1-39P01597 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV1-39P01597 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV1-39P01597 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV1-39P01597 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV1-39P01597 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.38■□□□□ 0.69
IGKV1-39P01597 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV1-39P01597 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV1-39P01597 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV1-39P01597 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV1-39P01597 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
IGKV1-39P01597 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV1-39P01597 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV1-39P01597 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
IGKV1-39P01597 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
IGKV1-39P01597 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV1-39P01597 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV1-39P01597 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
IGKV1-39P01597 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
IGKV1-39P01597 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IGKV1-39P01597 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IGKV1-39P01597 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IGKV1-39P01597 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IGKV1-39P01597 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
IGKV1-39P01597 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
IGKV1-39P01597 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IGKV1-39P01597 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
IGKV1-39P01597 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IGKV1-39P01597 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.35■□□□□ 0.69
IGKV1-39P01597 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.35■□□□□ 0.69
IGKV1-39P01597 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.35■□□□□ 0.69
IGKV1-39P01597 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IGKV1-39P01597 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IGKV1-39P01597 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IGKV1-39P01597 ZNRF2P2-203ENST00000454624 420 ntBASIC19.35■□□□□ 0.69
IGKV1-39P01597 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IGKV1-39P01597 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IGKV1-39P01597 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IGKV1-39P01597 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.34■□□□□ 0.69
IGKV1-39P01597 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
IGKV1-39P01597 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.34■□□□□ 0.69
IGKV1-39P01597 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.34■□□□□ 0.69
IGKV1-39P01597 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
IGKV1-39P01597 LINC00543-201ENST00000567234 1845 ntBASIC19.33■□□□□ 0.69
IGKV1-39P01597 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IGKV1-39P01597 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.33■□□□□ 0.68
IGKV1-39P01597 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
IGKV1-39P01597 CR559946.2-201ENST00000623684 991 ntBASIC19.33■□□□□ 0.68
IGKV1-39P01597 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IGKV1-39P01597 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.33■□□□□ 0.68
IGKV1-39P01597 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IGKV1-39P01597 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IGKV1-39P01597 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IGKV1-39P01597 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV1-39P01597 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV1-39P01597 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV1-39P01597 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV1-39P01597 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV1-39P01597 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.32■□□□□ 0.68
IGKV1-39P01597 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV1-39P01597 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.32■□□□□ 0.68
IGKV1-39P01597 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV1-39P01597 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGKV1-39P01597 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.31■□□□□ 0.68
IGKV1-39P01597 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IGKV1-39P01597 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.31■□□□□ 0.68
IGKV1-39P01597 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IGKV1-39P01597 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
IGKV1-39P01597 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.31■□□□□ 0.68
IGKV1-39P01597 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGKV1-39P01597 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGKV1-39P01597 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGKV1-39P01597 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1-39P01597 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1-39P01597 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1-39P01597 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1-39P01597 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1-39P01597 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1-39P01597 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.3■□□□□ 0.68
IGKV1-39P01597 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.3■□□□□ 0.68
IGKV1-39P01597 AC126177.7-201ENST00000547904 679 ntBASIC19.3■□□□□ 0.68
IGKV1-39P01597 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms