Protein–RNA interactions for Protein: O75140

DEPDC5, GATOR complex protein DEPDC5, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5O75140 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
DEPDC5O75140 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC35.6■■■■□ 3.29
DEPDC5O75140 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC35.6■■■■□ 3.29
DEPDC5O75140 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC35.6■■■■□ 3.29
DEPDC5O75140 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
DEPDC5O75140 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
DEPDC5O75140 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
DEPDC5O75140 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC35.59■■■■□ 3.29
DEPDC5O75140 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
DEPDC5O75140 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC35.59■■■■□ 3.29
DEPDC5O75140 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
DEPDC5O75140 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
DEPDC5O75140 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
DEPDC5O75140 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
DEPDC5O75140 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
DEPDC5O75140 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC35.58■■■■□ 3.29
DEPDC5O75140 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC35.57■■■■□ 3.29
DEPDC5O75140 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
DEPDC5O75140 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
DEPDC5O75140 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC35.57■■■■□ 3.28
DEPDC5O75140 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC35.57■■■■□ 3.28
DEPDC5O75140 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
DEPDC5O75140 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
DEPDC5O75140 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC35.56■■■■□ 3.28
DEPDC5O75140 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
DEPDC5O75140 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
DEPDC5O75140 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
DEPDC5O75140 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC35.55■■■■□ 3.28
DEPDC5O75140 AC011551.1-201ENST00000614101 683 ntBASIC35.55■■■■□ 3.28
DEPDC5O75140 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC35.55■■■■□ 3.28
DEPDC5O75140 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC35.55■■■■□ 3.28
DEPDC5O75140 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC35.54■■■■□ 3.28
DEPDC5O75140 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC35.54■■■■□ 3.28
DEPDC5O75140 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC35.54■■■■□ 3.28
DEPDC5O75140 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC35.53■■■■□ 3.28
DEPDC5O75140 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC35.53■■■■□ 3.28
DEPDC5O75140 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC35.53■■■■□ 3.28
DEPDC5O75140 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC35.53■■■■□ 3.28
DEPDC5O75140 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC35.53■■■■□ 3.28
DEPDC5O75140 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC35.52■■■■□ 3.28
DEPDC5O75140 SENP5-202ENST00000419026 973 ntTSL 3 BASIC35.52■■■■□ 3.28
DEPDC5O75140 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC35.52■■■■□ 3.28
DEPDC5O75140 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC35.52■■■■□ 3.28
DEPDC5O75140 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
DEPDC5O75140 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
DEPDC5O75140 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC35.5■■■■□ 3.27
DEPDC5O75140 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC35.5■■■■□ 3.27
DEPDC5O75140 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC35.5■■■■□ 3.27
DEPDC5O75140 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC35.5■■■■□ 3.27
DEPDC5O75140 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
DEPDC5O75140 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC35.49■■■■□ 3.27
DEPDC5O75140 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC35.49■■■■□ 3.27
DEPDC5O75140 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
DEPDC5O75140 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC35.49■■■■□ 3.27
DEPDC5O75140 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
DEPDC5O75140 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC35.48■■■■□ 3.27
DEPDC5O75140 AL139246.5-201ENST00000606645 996 ntBASIC35.48■■■■□ 3.27
DEPDC5O75140 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC35.48■■■■□ 3.27
DEPDC5O75140 AC139426.1-201ENST00000568218 2529 ntBASIC35.48■■■■□ 3.27
DEPDC5O75140 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
DEPDC5O75140 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC35.47■■■■□ 3.27
DEPDC5O75140 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC35.47■■■■□ 3.27
DEPDC5O75140 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC35.46■■■■□ 3.27
DEPDC5O75140 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
DEPDC5O75140 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
DEPDC5O75140 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC35.46■■■■□ 3.27
DEPDC5O75140 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC35.46■■■■□ 3.27
DEPDC5O75140 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC35.46■■■■□ 3.27
DEPDC5O75140 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
DEPDC5O75140 AP004609.3-201ENST00000610705 1884 ntBASIC35.45■■■■□ 3.27
DEPDC5O75140 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
DEPDC5O75140 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC35.44■■■■□ 3.26
DEPDC5O75140 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC35.44■■■■□ 3.26
DEPDC5O75140 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
DEPDC5O75140 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
DEPDC5O75140 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC35.43■■■■□ 3.26
DEPDC5O75140 AC092028.1-203ENST00000608262 953 ntBASIC35.43■■■■□ 3.26
DEPDC5O75140 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
DEPDC5O75140 RALB-208ENST00000631312 311 ntTSL 5 BASIC35.43■■■■□ 3.26
DEPDC5O75140 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
DEPDC5O75140 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC35.42■■■■□ 3.26
DEPDC5O75140 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
DEPDC5O75140 AL117332.1-201ENST00000622628 974 ntBASIC35.42■■■■□ 3.26
DEPDC5O75140 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
DEPDC5O75140 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
DEPDC5O75140 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC35.41■■■■□ 3.26
DEPDC5O75140 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC35.41■■■■□ 3.26
DEPDC5O75140 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
DEPDC5O75140 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
DEPDC5O75140 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
DEPDC5O75140 TSPY9P-201ENST00000440215 945 ntBASIC35.39■■■■□ 3.26
DEPDC5O75140 TSPY11P-201ENST00000442607 1045 ntBASIC35.39■■■■□ 3.26
DEPDC5O75140 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC35.39■■■■□ 3.26
DEPDC5O75140 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC35.39■■■■□ 3.26
DEPDC5O75140 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
DEPDC5O75140 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
DEPDC5O75140 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC35.39■■■■□ 3.26
DEPDC5O75140 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC35.39■■■■□ 3.26
DEPDC5O75140 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC35.39■■■■□ 3.26
DEPDC5O75140 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms