Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LINC01124-201ENST00000409786 2117 ntBASIC23.31■■□□□ 1.32
NPHS1O60500 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPHS1O60500 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
NPHS1O60500 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPHS1O60500 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPHS1O60500 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPHS1O60500 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NPHS1O60500 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPHS1O60500 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPHS1O60500 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPHS1O60500 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPHS1O60500 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPHS1O60500 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
NPHS1O60500 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.27■■□□□ 1.32
NPHS1O60500 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
NPHS1O60500 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
NPHS1O60500 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPHS1O60500 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.26■■□□□ 1.31
NPHS1O60500 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.26■■□□□ 1.31
NPHS1O60500 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
NPHS1O60500 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPHS1O60500 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPHS1O60500 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPHS1O60500 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.26■■□□□ 1.31
NPHS1O60500 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPHS1O60500 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPHS1O60500 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPHS1O60500 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
NPHS1O60500 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPHS1O60500 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
NPHS1O60500 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.25■■□□□ 1.31
NPHS1O60500 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPHS1O60500 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPHS1O60500 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPHS1O60500 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPHS1O60500 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPHS1O60500 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPHS1O60500 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPHS1O60500 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.23■■□□□ 1.31
NPHS1O60500 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPHS1O60500 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NPHS1O60500 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPHS1O60500 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NPHS1O60500 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.22■■□□□ 1.31
NPHS1O60500 LINC00543-201ENST00000567234 1845 ntBASIC23.22■■□□□ 1.31
NPHS1O60500 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.22■■□□□ 1.31
NPHS1O60500 MIR3648-2-201ENST00000581792 180 ntBASIC23.22■■□□□ 1.31
NPHS1O60500 MIR3648-1-201ENST00000615959 180 ntBASIC23.22■■□□□ 1.31
NPHS1O60500 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.22■■□□□ 1.31
NPHS1O60500 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPHS1O60500 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NPHS1O60500 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPHS1O60500 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPHS1O60500 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NPHS1O60500 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPHS1O60500 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NPHS1O60500 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.21■■□□□ 1.31
NPHS1O60500 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.21■■□□□ 1.31
NPHS1O60500 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPHS1O60500 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPHS1O60500 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.21■■□□□ 1.31
NPHS1O60500 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.31
NPHS1O60500 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NPHS1O60500 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NPHS1O60500 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NPHS1O60500 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPHS1O60500 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPHS1O60500 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NPHS1O60500 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.2■■□□□ 1.3
NPHS1O60500 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.2■■□□□ 1.3
NPHS1O60500 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.2■■□□□ 1.3
NPHS1O60500 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPHS1O60500 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NPHS1O60500 AC141586.4-201ENST00000624558 1573 ntBASIC23.19■■□□□ 1.3
NPHS1O60500 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPHS1O60500 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPHS1O60500 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NPHS1O60500 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPHS1O60500 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPHS1O60500 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
NPHS1O60500 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.18■■□□□ 1.3
NPHS1O60500 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NPHS1O60500 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.18■■□□□ 1.3
NPHS1O60500 AC025884.2-201ENST00000553429 711 ntBASIC23.18■■□□□ 1.3
NPHS1O60500 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms