Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF222A6NCQ9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF222A6NCQ9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF222A6NCQ9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF222A6NCQ9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF222A6NCQ9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RNF222A6NCQ9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF222A6NCQ9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF222A6NCQ9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF222A6NCQ9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF222A6NCQ9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF222A6NCQ9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.47■□□□□ 0.71
RNF222A6NCQ9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF222A6NCQ9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF222A6NCQ9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF222A6NCQ9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RNF222A6NCQ9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF222A6NCQ9 LINC00273-201ENST00000539813 1452 ntBASIC19.46■□□□□ 0.71
RNF222A6NCQ9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF222A6NCQ9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF222A6NCQ9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF222A6NCQ9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF222A6NCQ9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF222A6NCQ9 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.45■□□□□ 0.7
RNF222A6NCQ9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF222A6NCQ9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RNF222A6NCQ9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF222A6NCQ9 ABCB10P4-201ENST00000566803 2184 ntBASIC19.44■□□□□ 0.7
RNF222A6NCQ9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 AC004812.2-201ENST00000611079 2094 ntBASIC19.44■□□□□ 0.7
RNF222A6NCQ9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF222A6NCQ9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
RNF222A6NCQ9 LINC00565-201ENST00000562710 2331 ntBASIC19.42■□□□□ 0.7
RNF222A6NCQ9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF222A6NCQ9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF222A6NCQ9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF222A6NCQ9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF222A6NCQ9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF222A6NCQ9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF222A6NCQ9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF222A6NCQ9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF222A6NCQ9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF222A6NCQ9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF222A6NCQ9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF222A6NCQ9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF222A6NCQ9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF222A6NCQ9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF222A6NCQ9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF222A6NCQ9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.39■□□□□ 0.7
RNF222A6NCQ9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF222A6NCQ9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF222A6NCQ9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF222A6NCQ9 EP400NL-214ENST00000641289 2402 ntBASIC19.39■□□□□ 0.69
RNF222A6NCQ9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
RNF222A6NCQ9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF222A6NCQ9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF222A6NCQ9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF222A6NCQ9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
RNF222A6NCQ9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF222A6NCQ9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF222A6NCQ9 SLC6A10P-202ENST00000431994 2058 ntBASIC19.38■□□□□ 0.69
RNF222A6NCQ9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF222A6NCQ9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF222A6NCQ9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF222A6NCQ9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF222A6NCQ9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF222A6NCQ9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF222A6NCQ9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF222A6NCQ9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF222A6NCQ9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF222A6NCQ9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms