Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV20A0A0B4J274 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV20A0A0B4J274 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRAV20A0A0B4J274 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV20A0A0B4J274 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV20A0A0B4J274 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV20A0A0B4J274 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV20A0A0B4J274 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAV20A0A0B4J274 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TRAV20A0A0B4J274 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAV20A0A0B4J274 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
TRAV20A0A0B4J274 MIR4508-201ENST00000584178 70 ntBASIC20.08■□□□□ 0.81
TRAV20A0A0B4J274 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV20A0A0B4J274 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV20A0A0B4J274 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV20A0A0B4J274 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV20A0A0B4J274 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV20A0A0B4J274 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.07■□□□□ 0.8
TRAV20A0A0B4J274 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRAV20A0A0B4J274 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAV20A0A0B4J274 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRAV20A0A0B4J274 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAV20A0A0B4J274 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV20A0A0B4J274 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAV20A0A0B4J274 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAV20A0A0B4J274 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 AC103834.1-201ENST00000520383 144 ntBASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 PVT1_1.1-201ENST00000615125 194 ntBASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV20A0A0B4J274 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV20A0A0B4J274 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV20A0A0B4J274 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV20A0A0B4J274 CLDN5-201ENST00000403084 2357 ntBASIC20.04■□□□□ 0.8
TRAV20A0A0B4J274 AC019171.1-201ENST00000601251 1056 ntBASIC20.04■□□□□ 0.8
TRAV20A0A0B4J274 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV20A0A0B4J274 DRD5P2-201ENST00000421395 2012 ntBASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 AC093323.1-202ENST00000635031 2045 ntBASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 KRT18P10-201ENST00000388836 1287 ntBASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV20A0A0B4J274 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV20A0A0B4J274 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV20A0A0B4J274 AC009299.2-201ENST00000482477 511 ntBASIC20.02■□□□□ 0.8
TRAV20A0A0B4J274 AC087393.1-201ENST00000582896 145 ntBASIC20.02■□□□□ 0.8
TRAV20A0A0B4J274 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV20A0A0B4J274 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV20A0A0B4J274 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV20A0A0B4J274 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV20A0A0B4J274 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV20A0A0B4J274 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV20A0A0B4J274 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20■□□□□ 0.79
TRAV20A0A0B4J274 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 AL449106.1-201ENST00000608517 1980 ntBASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 LINC01003-201ENST00000564834 1764 ntBASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 RPS2P7-201ENST00000447334 885 ntBASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV20A0A0B4J274 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV20A0A0B4J274 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms