Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 AK4P3-201ENST00000418260 669 ntBASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.19■□□□□ 0.66
LMBRD1Q9NUN5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 SIGLEC16-201ENST00000599858 1437 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 AC005521.1-201ENST00000393351 872 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 POU5F1P6-201ENST00000466990 990 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 KRT8P26-201ENST00000534154 1276 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 PCGF3-213ENST00000620529 1899 ntBASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMBRD1Q9NUN5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 RCN1P2-201ENST00000398357 915 ntBASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.17■□□□□ 0.66
LMBRD1Q9NUN5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 GPAA1P2-202ENST00000606848 1787 ntBASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms