Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 LIN28AP1-201ENST00000429574 405 ntBASIC15.26■□□□□ 0.03
HMG20AQ9NP66 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 AC140113.3-201ENST00000605663 199 ntBASIC15.26■□□□□ 0.03
HMG20AQ9NP66 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 AC023157.3-201ENST00000619086 2088 ntBASIC15.26■□□□□ 0.03
HMG20AQ9NP66 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AL603832.2-201ENST00000566195 2125 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AC005104.2-201ENST00000427818 678 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 ATP5G1P1-201ENST00000448724 379 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AL023973.1-201ENST00000624619 620 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AL031432.5-201ENST00000641059 760 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 SNX18-202ENST00000343017 3140 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 LINC00167-201ENST00000530583 1419 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 CICP4-201ENST00000447359 2812 ntBASIC15.25■□□□□ 0.03
HMG20AQ9NP66 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.25■□□□□ 0.03
HMG20AQ9NP66 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HMG20AQ9NP66 ME2P1-201ENST00000426028 1970 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms