Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC018470.1-201ENST00000624790 3129 ntBASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 HIST3H2BA-201ENST00000436555 524 ntBASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC011495.1-201ENST00000498085 584 ntBASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 MIR4538-201ENST00000581377 78 ntBASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC008735.3-201ENST00000596646 500 ntBASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP4-1Q9BYQ7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 FAM86MP-201ENST00000340703 885 ntBASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP4-1Q9BYQ7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms