Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.46■□□□□ 0.39
SMOQ99835 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
SMOQ99835 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 AC084121.4-201ENST00000641598 221 ntBASIC17.46■□□□□ 0.39
SMOQ99835 AF228730.8-201ENST00000642140 221 ntBASIC17.46■□□□□ 0.39
SMOQ99835 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
SMOQ99835 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMOQ99835 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMOQ99835 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.45■□□□□ 0.38
SMOQ99835 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SMOQ99835 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
SMOQ99835 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 MIR346-201ENST00000362234 95 ntBASIC17.45■□□□□ 0.38
SMOQ99835 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 METTL21AP1-201ENST00000438852 635 ntBASIC17.45■□□□□ 0.38
SMOQ99835 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.45■□□□□ 0.38
SMOQ99835 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 IGHV3-62-201ENST00000520057 340 ntBASIC17.45■□□□□ 0.38
SMOQ99835 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMOQ99835 KRT8P23-201ENST00000560090 1207 ntBASIC17.45■□□□□ 0.38
SMOQ99835 AP000842.3-202ENST00000569238 1080 ntBASIC17.45■□□□□ 0.38
SMOQ99835 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.45■□□□□ 0.38
SMOQ99835 AC009093.7-201ENST00000623853 1223 ntBASIC17.45■□□□□ 0.38
SMOQ99835 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SMOQ99835 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.45■□□□□ 0.38
SMOQ99835 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
SMOQ99835 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.45■□□□□ 0.38
SMOQ99835 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMOQ99835 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.45■□□□□ 0.38
SMOQ99835 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
SMOQ99835 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
SMOQ99835 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 OR6D1P-202ENST00000641007 5290 ntBASIC17.44■□□□□ 0.38
SMOQ99835 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.44■□□□□ 0.38
SMOQ99835 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.44■□□□□ 0.38
SMOQ99835 UXT-AS1-201ENST00000590504 1525 ntBASIC17.44■□□□□ 0.38
SMOQ99835 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMOQ99835 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.44■□□□□ 0.38
SMOQ99835 TSEN15P1-201ENST00000423257 515 ntBASIC17.44■□□□□ 0.38
SMOQ99835 GPS2P2-201ENST00000430745 888 ntBASIC17.44■□□□□ 0.38
SMOQ99835 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.44■□□□□ 0.38
SMOQ99835 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.44■□□□□ 0.38
SMOQ99835 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.44■□□□□ 0.38
SMOQ99835 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.44■□□□□ 0.38
SMOQ99835 AC073389.1-201ENST00000595595 795 ntBASIC17.44■□□□□ 0.38
SMOQ99835 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.44■□□□□ 0.38
SMOQ99835 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.44■□□□□ 0.38
SMOQ99835 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMOQ99835 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms