Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC02012-201ENST00000608206 1725 ntBASIC12.71□□□□□ -0.37
AP1S3Q96PC3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 AC005915.1-201ENST00000624912 2018 ntBASIC12.71□□□□□ -0.37
AP1S3Q96PC3 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.71□□□□□ -0.37
AP1S3Q96PC3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 TSPY12P-201ENST00000421279 868 ntBASIC12.71□□□□□ -0.37
AP1S3Q96PC3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 AC098590.1-201ENST00000468126 897 ntBASIC12.71□□□□□ -0.37
AP1S3Q96PC3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP1S3Q96PC3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 AP002414.2-201ENST00000591780 3365 ntBASIC12.71□□□□□ -0.38
AP1S3Q96PC3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
AP1S3Q96PC3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CSPG4P11-201ENST00000560634 4910 ntBASIC12.7□□□□□ -0.38
AP1S3Q96PC3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 HMGA1P5-201ENST00000412453 271 ntBASIC12.7□□□□□ -0.38
AP1S3Q96PC3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 AC002558.1-201ENST00000488906 803 ntBASIC12.7□□□□□ -0.38
AP1S3Q96PC3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 AC112698.1-201ENST00000510299 916 ntBASIC12.7□□□□□ -0.38
AP1S3Q96PC3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP1S3Q96PC3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms