Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 AL645939.2-201ENST00000427340 991 ntBASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 AC109322.1-201ENST00000524499 1264 ntBASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 AC013467.2-201ENST00000605472 835 ntBASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 LINC00628-201ENST00000628516 1289 ntBASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCN4BQ8IWT1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 LINC00895-201ENST00000629028 1637 ntBASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
SCN4BQ8IWT1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN4BQ8IWT1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.57■□□□□ 0.4
SCN4BQ8IWT1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms