Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AL020989.1-201ENST00000422979 469 ntBASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AC104076.2-201ENST00000448912 469 ntBASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AL645728.1-201ENST00000366221 2101 ntBASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 TP73-AS1-210ENST00000637775 1455 ntBASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AL365203.3-201ENST00000609742 2057 ntBASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 AL365209.1-201ENST00000624418 6473 ntBASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 LINC00895-201ENST00000629028 1637 ntBASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 NTF6B-201ENST00000591913 560 ntBASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P1Q5VSP4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 DBET-201ENST00000630918 3363 ntBASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 AC099063.4-201ENST00000641099 1602 ntBASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 NUS1P1-201ENST00000446295 882 ntBASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 MINOS1P3-201ENST00000457048 203 ntBASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 Z69720.1-201ENST00000601483 472 ntBASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LCN1P1Q5VSP4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms