Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 AL596275.1-201ENST00000423464 877 ntBASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 AC011498.5-201ENST00000592027 486 ntBASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00242Q5T6M2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 TP73-AS1-210ENST00000637775 1455 ntBASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 DBET-201ENST00000630918 3363 ntBASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 AL671710.1-201ENST00000610245 2349 ntBASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 KRT8P26-201ENST00000534154 1276 ntBASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 AC006011.2-201ENST00000621313 1158 ntBASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 AC133561.5-201ENST00000635547 218 ntBASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00242Q5T6M2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00242Q5T6M2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00242Q5T6M2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms