Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 AC027307.2-201ENST00000591252 911 ntBASIC20.32■□□□□ 0.84
TNNI3KQ59H18 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 AC008267.7-201ENST00000624570 1194 ntBASIC20.32■□□□□ 0.84
TNNI3KQ59H18 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNNI3KQ59H18 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 FAM58DP-201ENST00000428076 619 ntBASIC20.31■□□□□ 0.84
TNNI3KQ59H18 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TNNI3KQ59H18 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AC005237.2-201ENST00000434368 219 ntBASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AC023141.5-201ENST00000458585 616 ntBASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AC020765.3-201ENST00000613051 740 ntBASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AC084121.4-201ENST00000641598 221 ntBASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AF228730.8-201ENST00000642140 221 ntBASIC20.3■□□□□ 0.84
TNNI3KQ59H18 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 AC073439.1-201ENST00000624121 1774 ntBASIC20.3■□□□□ 0.84
TNNI3KQ59H18 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNNI3KQ59H18 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 PRORSD1P-202ENST00000563365 2154 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 MIR346-201ENST00000362234 95 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AL139400.1-201ENST00000366220 510 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 KRT8P23-201ENST00000560090 1207 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AP000842.3-202ENST00000569238 1080 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AC073389.1-201ENST00000595595 795 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AC138932.1-201ENST00000534164 6830 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms