Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.5■□□□□ 0.39
CBX1P83916 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CBX1P83916 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CBX1P83916 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 AC006449.6-201ENST00000612330 2296 ntBASIC17.5■□□□□ 0.39
CBX1P83916 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
CBX1P83916 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CBX1P83916 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 AC006015.1-201ENST00000429970 570 ntBASIC17.5■□□□□ 0.39
CBX1P83916 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.5■□□□□ 0.39
CBX1P83916 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.5■□□□□ 0.39
CBX1P83916 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.5■□□□□ 0.39
CBX1P83916 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CBX1P83916 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX1P83916 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX1P83916 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX1P83916 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CBX1P83916 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.49■□□□□ 0.39
CBX1P83916 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CBX1P83916 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CBX1P83916 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.49■□□□□ 0.39
CBX1P83916 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.49■□□□□ 0.39
CBX1P83916 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX1P83916 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX1P83916 CR383656.2-201ENST00000548656 2254 ntBASIC17.49■□□□□ 0.39
CBX1P83916 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX1P83916 PCDHA3-202ENST00000532566 4594 ntBASIC17.48■□□□□ 0.39
CBX1P83916 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CBX1P83916 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CBX1P83916 AC091951.1-201ENST00000512854 2465 ntBASIC17.48■□□□□ 0.39
CBX1P83916 AC027601.5-201ENST00000624065 2482 ntBASIC17.48■□□□□ 0.39
CBX1P83916 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX1P83916 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.48■□□□□ 0.39
CBX1P83916 MYO15B-237ENST00000642007 4893 ntBASIC17.48■□□□□ 0.39
CBX1P83916 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CBX1P83916 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
CBX1P83916 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.48■□□□□ 0.39
CBX1P83916 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX1P83916 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CBX1P83916 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.48■□□□□ 0.39
CBX1P83916 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 AL356585.2-201ENST00000625078 2396 ntBASIC17.48■□□□□ 0.39
CBX1P83916 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX1P83916 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CBX1P83916 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 LINC00167-201ENST00000530583 1419 ntBASIC17.47■□□□□ 0.39
CBX1P83916 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CBX1P83916 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.47■□□□□ 0.39
CBX1P83916 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CBX1P83916 TMBIM7P-203ENST00000641617 1718 ntBASIC17.47■□□□□ 0.39
CBX1P83916 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms