Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDH4P55283 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH4P55283 AL031731.1-201ENST00000642131 2094 ntBASIC17.05■□□□□ 0.32
CDH4P55283 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 OR6D1P-203ENST00000641209 4860 ntBASIC17.04■□□□□ 0.32
CDH4P55283 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH4P55283 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDH4P55283 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.04■□□□□ 0.32
CDH4P55283 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH4P55283 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.04■□□□□ 0.32
CDH4P55283 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH4P55283 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CDH4P55283 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDH4P55283 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH4P55283 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH4P55283 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH4P55283 HLA-A-202ENST00000376806 1854 ntBASIC17.03■□□□□ 0.32
CDH4P55283 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
CDH4P55283 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 AC020916.1-201ENST00000587762 1774 ntBASIC17.03■□□□□ 0.32
CDH4P55283 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.03■□□□□ 0.32
CDH4P55283 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH4P55283 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH4P55283 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH4P55283 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH4P55283 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CDH4P55283 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH4P55283 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH4P55283 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH4P55283 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH4P55283 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH4P55283 AC020765.3-201ENST00000613051 740 ntBASIC17.03■□□□□ 0.32
CDH4P55283 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH4P55283 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH4P55283 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH4P55283 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 GPAA1P2-202ENST00000606848 1787 ntBASIC17.02■□□□□ 0.32
CDH4P55283 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH4P55283 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH4P55283 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH4P55283 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH4P55283 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH4P55283 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH4P55283 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms