Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLK2P49760 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK2P49760 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLK2P49760 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.83■□□□□ 0.6
CLK2P49760 AC105233.2-201ENST00000523697 349 ntBASIC18.83■□□□□ 0.6
CLK2P49760 AF228730.5-201ENST00000530288 346 ntBASIC18.83■□□□□ 0.6
CLK2P49760 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.83■□□□□ 0.6
CLK2P49760 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.83■□□□□ 0.6
CLK2P49760 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.83■□□□□ 0.6
CLK2P49760 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.83■□□□□ 0.6
CLK2P49760 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.83■□□□□ 0.6
CLK2P49760 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK2P49760 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.83■□□□□ 0.6
CLK2P49760 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.83■□□□□ 0.6
CLK2P49760 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.83■□□□□ 0.6
CLK2P49760 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.83■□□□□ 0.6
CLK2P49760 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLK2P49760 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLK2P49760 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLK2P49760 LINC01144-201ENST00000626198 1710 ntBASIC18.83■□□□□ 0.6
CLK2P49760 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLK2P49760 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLK2P49760 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.82■□□□□ 0.6
CLK2P49760 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLK2P49760 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.82■□□□□ 0.6
CLK2P49760 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.82■□□□□ 0.6
CLK2P49760 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.82■□□□□ 0.6
CLK2P49760 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.82■□□□□ 0.6
CLK2P49760 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.82■□□□□ 0.6
CLK2P49760 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.82■□□□□ 0.6
CLK2P49760 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.82■□□□□ 0.6
CLK2P49760 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.82■□□□□ 0.6
CLK2P49760 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.82■□□□□ 0.6
CLK2P49760 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
CLK2P49760 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLK2P49760 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 ALOX12P2-203ENST00000570921 1945 ntBASIC18.81■□□□□ 0.6
CLK2P49760 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.81■□□□□ 0.6
CLK2P49760 AC005237.2-201ENST00000434368 219 ntBASIC18.81■□□□□ 0.6
CLK2P49760 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 HLA-J-203ENST00000494367 1087 ntBASIC18.81■□□□□ 0.6
CLK2P49760 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.81■□□□□ 0.6
CLK2P49760 SLC25A39P2-201ENST00000537614 270 ntBASIC18.81■□□□□ 0.6
CLK2P49760 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLK2P49760 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CLK2P49760 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.81■□□□□ 0.6
CLK2P49760 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CLK2P49760 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.81■□□□□ 0.6
CLK2P49760 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.81■□□□□ 0.6
CLK2P49760 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK2P49760 ME2P1-201ENST00000426028 1970 ntBASIC18.81■□□□□ 0.6
CLK2P49760 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLK2P49760 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.8■□□□□ 0.6
CLK2P49760 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLK2P49760 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
CLK2P49760 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLK2P49760 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLK2P49760 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLK2P49760 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLK2P49760 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLK2P49760 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLK2P49760 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.8■□□□□ 0.6
CLK2P49760 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.8■□□□□ 0.6
CLK2P49760 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLK2P49760 IGHV3-62-201ENST00000520057 340 ntBASIC18.8■□□□□ 0.6
CLK2P49760 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.8■□□□□ 0.6
CLK2P49760 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms