Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC10.67□□□□□ -0.7
UBE2AP49459 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
UBE2AP49459 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.67□□□□□ -0.7
UBE2AP49459 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2AP49459 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2AP49459 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
UBE2AP49459 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 CCS-201ENST00000310190 942 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 S100A2-206ENST00000497140 697 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC10.66□□□□□ -0.7
UBE2AP49459 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 BNIP3P18-201ENST00000593976 575 ntBASIC10.66□□□□□ -0.7
UBE2AP49459 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
UBE2AP49459 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 INTS4P1-201ENST00000438455 1935 ntBASIC10.66□□□□□ -0.7
UBE2AP49459 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC10.66□□□□□ -0.7
UBE2AP49459 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UBE2AP49459 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
UBE2AP49459 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
UBE2AP49459 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
UBE2AP49459 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
UBE2AP49459 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
UBE2AP49459 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC10.65□□□□□ -0.7
UBE2AP49459 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC10.65□□□□□ -0.7
UBE2AP49459 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC10.65□□□□□ -0.7
UBE2AP49459 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
UBE2AP49459 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC10.65□□□□□ -0.7
UBE2AP49459 IGHV3-47-201ENST00000425060 335 ntBASIC10.65□□□□□ -0.7
UBE2AP49459 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC10.65□□□□□ -0.7
UBE2AP49459 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC10.65□□□□□ -0.7
UBE2AP49459 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
UBE2AP49459 LINC01711-201ENST00000598340 967 ntBASIC10.65□□□□□ -0.7
UBE2AP49459 AL445228.2-201ENST00000605589 952 ntBASIC10.65□□□□□ -0.7
UBE2AP49459 AC010331.1-201ENST00000611423 582 ntBASIC10.65□□□□□ -0.7
UBE2AP49459 AD001527.2-201ENST00000622994 785 ntBASIC10.65□□□□□ -0.7
UBE2AP49459 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
UBE2AP49459 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC10.65□□□□□ -0.7
UBE2AP49459 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 AC106886.4-201ENST00000623557 2502 ntBASIC10.65□□□□□ -0.7
UBE2AP49459 CICP6-201ENST00000457191 2729 ntBASIC10.65□□□□□ -0.7
UBE2AP49459 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
UBE2AP49459 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms