Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
FNTAP49354 TMPOP1-202ENST00000424642 1267 ntBASIC17.42■□□□□ 0.38
FNTAP49354 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.42■□□□□ 0.38
FNTAP49354 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.42■□□□□ 0.38
FNTAP49354 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.42■□□□□ 0.38
FNTAP49354 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.42■□□□□ 0.38
FNTAP49354 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FNTAP49354 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.42■□□□□ 0.38
FNTAP49354 AC092329.2-201ENST00000598402 547 ntBASIC17.42■□□□□ 0.38
FNTAP49354 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.42■□□□□ 0.38
FNTAP49354 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FNTAP49354 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.42■□□□□ 0.38
FNTAP49354 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.42■□□□□ 0.38
FNTAP49354 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.42■□□□□ 0.38
FNTAP49354 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FNTAP49354 AL596087.1-201ENST00000400979 1969 ntBASIC17.42■□□□□ 0.38
FNTAP49354 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FNTAP49354 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FNTAP49354 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 TOP3BP1-201ENST00000420768 1380 ntBASIC17.41■□□□□ 0.38
FNTAP49354 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
FNTAP49354 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 SNX33P1-201ENST00000592116 1762 ntBASIC17.41■□□□□ 0.38
FNTAP49354 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 LINC00265-3P-201ENST00000447588 903 ntBASIC17.41■□□□□ 0.38
FNTAP49354 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.41■□□□□ 0.38
FNTAP49354 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.41■□□□□ 0.38
FNTAP49354 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
FNTAP49354 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.41■□□□□ 0.38
FNTAP49354 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.41■□□□□ 0.38
FNTAP49354 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FNTAP49354 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.4■□□□□ 0.38
FNTAP49354 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FNTAP49354 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FNTAP49354 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.4■□□□□ 0.38
FNTAP49354 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 PRYP5-201ENST00000451909 266 ntBASIC17.4■□□□□ 0.38
FNTAP49354 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.4■□□□□ 0.38
FNTAP49354 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.4■□□□□ 0.38
FNTAP49354 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.4■□□□□ 0.38
FNTAP49354 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FNTAP49354 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.4■□□□□ 0.38
FNTAP49354 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FNTAP49354 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FNTAP49354 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FNTAP49354 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms